Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.71■■□□□ 1.07
CTR9Q6PD62 AC004263.2-201ENST00000617183 678 ntBASIC21.71■■□□□ 1.07
CTR9Q6PD62 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CTR9Q6PD62 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CTR9Q6PD62 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC21.71■■□□□ 1.07
CTR9Q6PD62 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
CTR9Q6PD62 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTR9Q6PD62 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CTR9Q6PD62 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CTR9Q6PD62 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.07
CTR9Q6PD62 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
CTR9Q6PD62 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CTR9Q6PD62 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CTR9Q6PD62 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.7■■□□□ 1.06
CTR9Q6PD62 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.7■■□□□ 1.06
CTR9Q6PD62 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.7■■□□□ 1.06
CTR9Q6PD62 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.7■■□□□ 1.06
CTR9Q6PD62 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CTR9Q6PD62 AC092329.2-201ENST00000598402 547 ntBASIC21.7■■□□□ 1.06
CTR9Q6PD62 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CTR9Q6PD62 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CTR9Q6PD62 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTR9Q6PD62 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTR9Q6PD62 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTR9Q6PD62 AL353692.3-201ENST00000407031 1396 ntBASIC21.7■■□□□ 1.06
CTR9Q6PD62 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CTR9Q6PD62 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTR9Q6PD62 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.7■■□□□ 1.06
CTR9Q6PD62 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
CTR9Q6PD62 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTR9Q6PD62 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTR9Q6PD62 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CTR9Q6PD62 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTR9Q6PD62 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTR9Q6PD62 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTR9Q6PD62 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTR9Q6PD62 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTR9Q6PD62 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTR9Q6PD62 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CTR9Q6PD62 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTR9Q6PD62 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
CTR9Q6PD62 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CTR9Q6PD62 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CTR9Q6PD62 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.69■■□□□ 1.06
CTR9Q6PD62 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.69■■□□□ 1.06
CTR9Q6PD62 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CTR9Q6PD62 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.69■■□□□ 1.06
CTR9Q6PD62 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
CTR9Q6PD62 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.69■■□□□ 1.06
CTR9Q6PD62 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CTR9Q6PD62 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.69■■□□□ 1.06
CTR9Q6PD62 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CTR9Q6PD62 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CTR9Q6PD62 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTR9Q6PD62 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTR9Q6PD62 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.69■■□□□ 1.06
CTR9Q6PD62 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTR9Q6PD62 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.68■■□□□ 1.06
CTR9Q6PD62 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CTR9Q6PD62 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTR9Q6PD62 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTR9Q6PD62 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTR9Q6PD62 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CTR9Q6PD62 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CTR9Q6PD62 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CTR9Q6PD62 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.68■■□□□ 1.06
CTR9Q6PD62 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.68■■□□□ 1.06
CTR9Q6PD62 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.68■■□□□ 1.06
CTR9Q6PD62 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTR9Q6PD62 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.68■■□□□ 1.06
CTR9Q6PD62 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.68■■□□□ 1.06
CTR9Q6PD62 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21.68■■□□□ 1.06
CTR9Q6PD62 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTR9Q6PD62 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CTR9Q6PD62 KRT18P1-202ENST00000452408 1331 ntBASIC21.68■■□□□ 1.06
CTR9Q6PD62 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.68■■□□□ 1.06
CTR9Q6PD62 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTR9Q6PD62 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTR9Q6PD62 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTR9Q6PD62 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTR9Q6PD62 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTR9Q6PD62 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.68■■□□□ 1.06
CTR9Q6PD62 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CTR9Q6PD62 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.68■■□□□ 1.06
CTR9Q6PD62 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.68■■□□□ 1.06
CTR9Q6PD62 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTR9Q6PD62 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
CTR9Q6PD62 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTR9Q6PD62 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTR9Q6PD62 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTR9Q6PD62 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.67■■□□□ 1.06
CTR9Q6PD62 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CTR9Q6PD62 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTR9Q6PD62 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CTR9Q6PD62 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.67■■□□□ 1.06
CTR9Q6PD62 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CTR9Q6PD62 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CTR9Q6PD62 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTR9Q6PD62 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTR9Q6PD62 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms