Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC099343.3-201ENST00000605834 2503 ntBASIC19.65■□□□□ 0.74
CNKSR3Q6P9H4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CNKSR3Q6P9H4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
CNKSR3Q6P9H4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNKSR3Q6P9H4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
CNKSR3Q6P9H4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CNKSR3Q6P9H4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CNKSR3Q6P9H4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CNKSR3Q6P9H4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CNKSR3Q6P9H4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CNKSR3Q6P9H4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CNKSR3Q6P9H4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNKSR3Q6P9H4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNKSR3Q6P9H4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.64■□□□□ 0.73
CNKSR3Q6P9H4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.64■□□□□ 0.73
CNKSR3Q6P9H4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.64■□□□□ 0.73
CNKSR3Q6P9H4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.64■□□□□ 0.73
CNKSR3Q6P9H4 AC010327.4-202ENST00000591484 748 ntBASIC19.64■□□□□ 0.73
CNKSR3Q6P9H4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CNKSR3Q6P9H4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CNKSR3Q6P9H4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CNKSR3Q6P9H4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNKSR3Q6P9H4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNKSR3Q6P9H4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.64■□□□□ 0.73
CNKSR3Q6P9H4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNKSR3Q6P9H4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNKSR3Q6P9H4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.64■□□□□ 0.73
CNKSR3Q6P9H4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CNKSR3Q6P9H4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNKSR3Q6P9H4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
CNKSR3Q6P9H4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNKSR3Q6P9H4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.63■□□□□ 0.73
CNKSR3Q6P9H4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNKSR3Q6P9H4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
CNKSR3Q6P9H4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.63■□□□□ 0.73
CNKSR3Q6P9H4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.63■□□□□ 0.73
CNKSR3Q6P9H4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNKSR3Q6P9H4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNKSR3Q6P9H4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNKSR3Q6P9H4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.63■□□□□ 0.73
CNKSR3Q6P9H4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNKSR3Q6P9H4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.63■□□□□ 0.73
CNKSR3Q6P9H4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNKSR3Q6P9H4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.63■□□□□ 0.73
CNKSR3Q6P9H4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CNKSR3Q6P9H4 RPSAP43-201ENST00000402237 625 ntBASIC19.63■□□□□ 0.73
CNKSR3Q6P9H4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.63■□□□□ 0.73
CNKSR3Q6P9H4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.63■□□□□ 0.73
CNKSR3Q6P9H4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.63■□□□□ 0.73
CNKSR3Q6P9H4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.63■□□□□ 0.73
CNKSR3Q6P9H4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.63■□□□□ 0.73
CNKSR3Q6P9H4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CNKSR3Q6P9H4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CNKSR3Q6P9H4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.63■□□□□ 0.73
CNKSR3Q6P9H4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.63■□□□□ 0.73
CNKSR3Q6P9H4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNKSR3Q6P9H4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CNKSR3Q6P9H4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.63■□□□□ 0.73
CNKSR3Q6P9H4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNKSR3Q6P9H4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNKSR3Q6P9H4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.62■□□□□ 0.73
CNKSR3Q6P9H4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNKSR3Q6P9H4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNKSR3Q6P9H4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CNKSR3Q6P9H4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNKSR3Q6P9H4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNKSR3Q6P9H4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNKSR3Q6P9H4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.62■□□□□ 0.73
CNKSR3Q6P9H4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNKSR3Q6P9H4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.62■□□□□ 0.73
CNKSR3Q6P9H4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNKSR3Q6P9H4 GPX1P2-201ENST00000429271 606 ntBASIC19.62■□□□□ 0.73
CNKSR3Q6P9H4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.62■□□□□ 0.73
CNKSR3Q6P9H4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.62■□□□□ 0.73
CNKSR3Q6P9H4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNKSR3Q6P9H4 AC105339.3-201ENST00000560043 636 ntBASIC19.62■□□□□ 0.73
CNKSR3Q6P9H4 AC040169.1-201ENST00000565382 521 ntBASIC19.62■□□□□ 0.73
CNKSR3Q6P9H4 MTDHP4-201ENST00000600287 670 ntBASIC19.62■□□□□ 0.73
CNKSR3Q6P9H4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.62■□□□□ 0.73
CNKSR3Q6P9H4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNKSR3Q6P9H4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNKSR3Q6P9H4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNKSR3Q6P9H4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.62■□□□□ 0.73
CNKSR3Q6P9H4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNKSR3Q6P9H4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNKSR3Q6P9H4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNKSR3Q6P9H4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.62■□□□□ 0.73
CNKSR3Q6P9H4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNKSR3Q6P9H4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNKSR3Q6P9H4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNKSR3Q6P9H4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.61■□□□□ 0.73
CNKSR3Q6P9H4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNKSR3Q6P9H4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.61■□□□□ 0.73
CNKSR3Q6P9H4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNKSR3Q6P9H4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.61■□□□□ 0.73
CNKSR3Q6P9H4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNKSR3Q6P9H4 YBX2P1-201ENST00000394192 760 ntBASIC19.61■□□□□ 0.73
CNKSR3Q6P9H4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.61■□□□□ 0.73
CNKSR3Q6P9H4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.61■□□□□ 0.73
CNKSR3Q6P9H4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms