Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SWSAP1Q6NVH7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.36■□□□□ 0.85
SWSAP1Q6NVH7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SWSAP1Q6NVH7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SWSAP1Q6NVH7 AC087289.5-201ENST00000586076 3175 ntBASIC20.36■□□□□ 0.85
SWSAP1Q6NVH7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SWSAP1Q6NVH7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SWSAP1Q6NVH7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SWSAP1Q6NVH7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SWSAP1Q6NVH7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SWSAP1Q6NVH7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
SWSAP1Q6NVH7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
SWSAP1Q6NVH7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.35■□□□□ 0.85
SWSAP1Q6NVH7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SWSAP1Q6NVH7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SWSAP1Q6NVH7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SWSAP1Q6NVH7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SWSAP1Q6NVH7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.35■□□□□ 0.85
SWSAP1Q6NVH7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SWSAP1Q6NVH7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
SWSAP1Q6NVH7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
SWSAP1Q6NVH7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SWSAP1Q6NVH7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SWSAP1Q6NVH7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SWSAP1Q6NVH7 AL450487.1-201ENST00000426799 995 ntBASIC20.35■□□□□ 0.85
SWSAP1Q6NVH7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.35■□□□□ 0.85
SWSAP1Q6NVH7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.35■□□□□ 0.85
SWSAP1Q6NVH7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.35■□□□□ 0.85
SWSAP1Q6NVH7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SWSAP1Q6NVH7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SWSAP1Q6NVH7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SWSAP1Q6NVH7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SWSAP1Q6NVH7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SWSAP1Q6NVH7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SWSAP1Q6NVH7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SWSAP1Q6NVH7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.35■□□□□ 0.85
SWSAP1Q6NVH7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SWSAP1Q6NVH7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SWSAP1Q6NVH7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SWSAP1Q6NVH7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SWSAP1Q6NVH7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
SWSAP1Q6NVH7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SWSAP1Q6NVH7 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.34■□□□□ 0.85
SWSAP1Q6NVH7 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.34■□□□□ 0.85
SWSAP1Q6NVH7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.34■□□□□ 0.85
SWSAP1Q6NVH7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SWSAP1Q6NVH7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
SWSAP1Q6NVH7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SWSAP1Q6NVH7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SWSAP1Q6NVH7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SWSAP1Q6NVH7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.34■□□□□ 0.85
SWSAP1Q6NVH7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SWSAP1Q6NVH7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SWSAP1Q6NVH7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SWSAP1Q6NVH7 AC233702.3-201ENST00000578656 1387 ntBASIC20.34■□□□□ 0.85
SWSAP1Q6NVH7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.33■□□□□ 0.85
SWSAP1Q6NVH7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SWSAP1Q6NVH7 AC093503.3-201ENST00000624917 2352 ntBASIC20.33■□□□□ 0.85
SWSAP1Q6NVH7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SWSAP1Q6NVH7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SWSAP1Q6NVH7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SWSAP1Q6NVH7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SWSAP1Q6NVH7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.33■□□□□ 0.85
SWSAP1Q6NVH7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.33■□□□□ 0.85
SWSAP1Q6NVH7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SWSAP1Q6NVH7 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.33■□□□□ 0.85
SWSAP1Q6NVH7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.33■□□□□ 0.85
SWSAP1Q6NVH7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SWSAP1Q6NVH7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.33■□□□□ 0.84
SWSAP1Q6NVH7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
SWSAP1Q6NVH7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SWSAP1Q6NVH7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SWSAP1Q6NVH7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SWSAP1Q6NVH7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SWSAP1Q6NVH7 LINC00602-201ENST00000629776 2065 ntBASIC20.33■□□□□ 0.84
SWSAP1Q6NVH7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 NUS1P1-201ENST00000446295 882 ntBASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 AC012615.1-201ENST00000565797 1299 ntBASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SWSAP1Q6NVH7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms