Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC38Q5VT99 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
LRRC38Q5VT99 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.03■□□□□ 0.64
LRRC38Q5VT99 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC38Q5VT99 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC38Q5VT99 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC38Q5VT99 AP000997.3-201ENST00000623333 2250 ntBASIC19.03■□□□□ 0.64
LRRC38Q5VT99 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.03■□□□□ 0.64
LRRC38Q5VT99 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC38Q5VT99 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC38Q5VT99 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC38Q5VT99 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC38Q5VT99 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
LRRC38Q5VT99 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC38Q5VT99 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC38Q5VT99 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC38Q5VT99 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC38Q5VT99 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC38Q5VT99 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.02■□□□□ 0.64
LRRC38Q5VT99 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.02■□□□□ 0.64
LRRC38Q5VT99 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
LRRC38Q5VT99 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.02■□□□□ 0.64
LRRC38Q5VT99 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC38Q5VT99 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC38Q5VT99 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC38Q5VT99 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
LRRC38Q5VT99 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC38Q5VT99 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.02■□□□□ 0.64
LRRC38Q5VT99 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC38Q5VT99 HMGA1P5-201ENST00000412453 271 ntBASIC19.02■□□□□ 0.64
LRRC38Q5VT99 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.02■□□□□ 0.64
LRRC38Q5VT99 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.02■□□□□ 0.64
LRRC38Q5VT99 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.02■□□□□ 0.64
LRRC38Q5VT99 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.02■□□□□ 0.64
LRRC38Q5VT99 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
LRRC38Q5VT99 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC38Q5VT99 AC134043.2-201ENST00000624206 2238 ntBASIC19.02■□□□□ 0.64
LRRC38Q5VT99 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC38Q5VT99 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
LRRC38Q5VT99 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRRC38Q5VT99 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
LRRC38Q5VT99 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRRC38Q5VT99 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.02■□□□□ 0.63
LRRC38Q5VT99 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
LRRC38Q5VT99 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRC38Q5VT99 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LRRC38Q5VT99 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC38Q5VT99 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC38Q5VT99 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC38Q5VT99 KRT18P55-202ENST00000578578 1546 ntBASIC19.01■□□□□ 0.63
LRRC38Q5VT99 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
LRRC38Q5VT99 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC38Q5VT99 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC38Q5VT99 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC38Q5VT99 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRC38Q5VT99 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
LRRC38Q5VT99 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRC38Q5VT99 AC009947.2-201ENST00000444014 672 ntBASIC19.01■□□□□ 0.63
LRRC38Q5VT99 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.01■□□□□ 0.63
LRRC38Q5VT99 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRC38Q5VT99 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.01■□□□□ 0.63
LRRC38Q5VT99 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC38Q5VT99 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC38Q5VT99 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC38Q5VT99 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC38Q5VT99 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
LRRC38Q5VT99 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRC38Q5VT99 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
LRRC38Q5VT99 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC38Q5VT99 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC38Q5VT99 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC38Q5VT99 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC38Q5VT99 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19■□□□□ 0.63
LRRC38Q5VT99 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19■□□□□ 0.63
LRRC38Q5VT99 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRRC38Q5VT99 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC38Q5VT99 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC38Q5VT99 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19■□□□□ 0.63
LRRC38Q5VT99 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19■□□□□ 0.63
LRRC38Q5VT99 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC38Q5VT99 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC38Q5VT99 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRRC38Q5VT99 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRRC38Q5VT99 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19■□□□□ 0.63
LRRC38Q5VT99 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19■□□□□ 0.63
LRRC38Q5VT99 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19■□□□□ 0.63
LRRC38Q5VT99 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC38Q5VT99 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19■□□□□ 0.63
LRRC38Q5VT99 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19■□□□□ 0.63
LRRC38Q5VT99 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19■□□□□ 0.63
LRRC38Q5VT99 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19■□□□□ 0.63
LRRC38Q5VT99 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19■□□□□ 0.63
LRRC38Q5VT99 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC38Q5VT99 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC38Q5VT99 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
LRRC38Q5VT99 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19■□□□□ 0.63
LRRC38Q5VT99 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19■□□□□ 0.63
LRRC38Q5VT99 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC38Q5VT99 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
LRRC38Q5VT99 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms