Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CDC42BPAQ5VT25 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC27.62■■■□□ 2.01
CDC42BPAQ5VT25 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC27.62■■■□□ 2.01
CDC42BPAQ5VT25 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 AC092183.1-201ENST00000469884 875 ntBASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 AC055717.3-201ENST00000622967 595 ntBASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 AP002414.3-201ENST00000589352 1468 ntBASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 AL591424.1-201ENST00000442569 1213 ntBASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 AL356488.2-201ENST00000602755 427 ntBASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 HOTTIP_1.1-201ENST00000620415 57 ntBASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC27.61■■■□□ 2.01
CDC42BPAQ5VT25 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
CDC42BPAQ5VT25 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
CDC42BPAQ5VT25 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
CDC42BPAQ5VT25 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
CDC42BPAQ5VT25 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC27.6■■■□□ 2.01
CDC42BPAQ5VT25 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
CDC42BPAQ5VT25 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
CDC42BPAQ5VT25 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
CDC42BPAQ5VT25 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
CDC42BPAQ5VT25 KIRREL3-AS3-201ENST00000404882 831 ntBASIC27.6■■■□□ 2.01
CDC42BPAQ5VT25 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
CDC42BPAQ5VT25 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC27.6■■■□□ 2.01
CDC42BPAQ5VT25 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
CDC42BPAQ5VT25 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC27.6■■■□□ 2.01
CDC42BPAQ5VT25 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
CDC42BPAQ5VT25 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
CDC42BPAQ5VT25 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
CDC42BPAQ5VT25 AC132938.6-201ENST00000623828 1655 ntBASIC27.6■■■□□ 2.01
CDC42BPAQ5VT25 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC27.6■■■□□ 2.01
CDC42BPAQ5VT25 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC27.59■■■□□ 2.01
CDC42BPAQ5VT25 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
CDC42BPAQ5VT25 AC079776.2-201ENST00000641154 1609 ntBASIC27.59■■■□□ 2.01
CDC42BPAQ5VT25 AC005082.1-201ENST00000413042 2259 ntBASIC27.59■■■□□ 2.01
CDC42BPAQ5VT25 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
CDC42BPAQ5VT25 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
CDC42BPAQ5VT25 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC27.59■■■□□ 2.01
CDC42BPAQ5VT25 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC27.59■■■□□ 2.01
CDC42BPAQ5VT25 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC27.59■■■□□ 2.01
CDC42BPAQ5VT25 AC107918.4-202ENST00000641623 219 ntBASIC27.59■■■□□ 2.01
CDC42BPAQ5VT25 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
CDC42BPAQ5VT25 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC27.59■■■□□ 2.01
CDC42BPAQ5VT25 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC27.59■■■□□ 2.01
CDC42BPAQ5VT25 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
CDC42BPAQ5VT25 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC27.59■■■□□ 2.01
CDC42BPAQ5VT25 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
CDC42BPAQ5VT25 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CDC42BPAQ5VT25 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC27.58■■■□□ 2.01
CDC42BPAQ5VT25 FUOM-202ENST00000368551 628 ntTSL 3 BASIC27.58■■■□□ 2.01
CDC42BPAQ5VT25 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC27.58■■■□□ 2.01
CDC42BPAQ5VT25 YBX2P1-201ENST00000394192 760 ntBASIC27.58■■■□□ 2.01
CDC42BPAQ5VT25 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC27.58■■■□□ 2.01
CDC42BPAQ5VT25 AC007967.2-201ENST00000432613 625 ntBASIC27.58■■■□□ 2.01
CDC42BPAQ5VT25 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC27.58■■■□□ 2.01
CDC42BPAQ5VT25 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC27.58■■■□□ 2.01
CDC42BPAQ5VT25 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC27.58■■■□□ 2.01
CDC42BPAQ5VT25 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC27.58■■■□□ 2.01
CDC42BPAQ5VT25 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CDC42BPAQ5VT25 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
CDC42BPAQ5VT25 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CDC42BPAQ5VT25 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
CDC42BPAQ5VT25 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CDC42BPAQ5VT25 KRT18P27-201ENST00000427733 1299 ntBASIC27.58■■■□□ 2.01
CDC42BPAQ5VT25 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC27.58■■■□□ 2.01
CDC42BPAQ5VT25 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
CDC42BPAQ5VT25 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CDC42BPAQ5VT25 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC27.57■■■□□ 2
CDC42BPAQ5VT25 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC27.57■■■□□ 2
CDC42BPAQ5VT25 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC27.57■■■□□ 2
CDC42BPAQ5VT25 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
CDC42BPAQ5VT25 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC27.57■■■□□ 2
CDC42BPAQ5VT25 HLA-J-201ENST00000462773 1622 ntBASIC27.57■■■□□ 2
CDC42BPAQ5VT25 SNCG-201ENST00000348795 684 ntTSL 2 BASIC27.57■■■□□ 2
CDC42BPAQ5VT25 FAM220CP-201ENST00000395253 831 ntBASIC27.57■■■□□ 2
CDC42BPAQ5VT25 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC27.57■■■□□ 2
CDC42BPAQ5VT25 AC027601.4-201ENST00000611259 610 ntBASIC27.57■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms