Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
LINC01554Q52M75 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
LINC01554Q52M75 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
LINC01554Q52M75 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
LINC01554Q52M75 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
LINC01554Q52M75 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
LINC01554Q52M75 AGK-211ENST00000629555 2765 ntTSL 5 BASIC9.23□□□□□ -0.93
LINC01554Q52M75 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 AC011484.1-201ENST00000377652 1995 ntBASIC9.23□□□□□ -0.93
LINC01554Q52M75 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC9.23□□□□□ -0.93
LINC01554Q52M75 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
LINC01554Q52M75 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC9.22□□□□□ -0.93
LINC01554Q52M75 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC9.22□□□□□ -0.93
LINC01554Q52M75 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC9.22□□□□□ -0.93
LINC01554Q52M75 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC9.22□□□□□ -0.93
LINC01554Q52M75 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 BX005040.4-201ENST00000637145 1518 ntBASIC9.22□□□□□ -0.93
LINC01554Q52M75 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC9.22□□□□□ -0.93
LINC01554Q52M75 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC9.22□□□□□ -0.93
LINC01554Q52M75 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC9.22□□□□□ -0.93
LINC01554Q52M75 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 AL354751.1-201ENST00000412768 1863 ntBASIC9.22□□□□□ -0.93
LINC01554Q52M75 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC9.22□□□□□ -0.93
LINC01554Q52M75 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
LINC01554Q52M75 MFF-208ENST00000409616 1247 ntTSL 5 BASIC9.22□□□□□ -0.93
LINC01554Q52M75 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC9.22□□□□□ -0.93
LINC01554Q52M75 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
LINC01554Q52M75 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC9.22□□□□□ -0.93
LINC01554Q52M75 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC9.22□□□□□ -0.93
LINC01554Q52M75 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC9.22□□□□□ -0.93
LINC01554Q52M75 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC9.22□□□□□ -0.93
LINC01554Q52M75 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
LINC01554Q52M75 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC9.22□□□□□ -0.93
LINC01554Q52M75 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC9.22□□□□□ -0.93
LINC01554Q52M75 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
LINC01554Q52M75 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC9.22□□□□□ -0.93
LINC01554Q52M75 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC9.22□□□□□ -0.93
LINC01554Q52M75 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01554Q52M75 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
LINC01554Q52M75 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
LINC01554Q52M75 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
LINC01554Q52M75 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.93
LINC01554Q52M75 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC9.21□□□□□ -0.93
LINC01554Q52M75 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.93
LINC01554Q52M75 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC9.21□□□□□ -0.93
LINC01554Q52M75 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC9.21□□□□□ -0.93
LINC01554Q52M75 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
LINC01554Q52M75 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
LINC01554Q52M75 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
LINC01554Q52M75 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
LINC01554Q52M75 AC061975.6-201ENST00000579045 1553 ntBASIC9.21□□□□□ -0.93
LINC01554Q52M75 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
LINC01554Q52M75 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
LINC01554Q52M75 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
LINC01554Q52M75 AC097376.2-205ENST00000610159 5334 ntBASIC9.21□□□□□ -0.93
LINC01554Q52M75 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms