Protein–RNA interactions for Protein: Q05655

PRKCD, Protein kinase C delta type, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCDQ05655 AC135776.1-201ENST00000319817 2481 ntBASIC16.9■□□□□ 0.3
PRKCDQ05655 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRKCDQ05655 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRKCDQ05655 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRKCDQ05655 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.9■□□□□ 0.3
PRKCDQ05655 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRKCDQ05655 AC008556.1-201ENST00000610908 2040 ntBASIC16.89■□□□□ 0.29
PRKCDQ05655 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRKCDQ05655 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRKCDQ05655 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRKCDQ05655 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PRKCDQ05655 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRKCDQ05655 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRKCDQ05655 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRKCDQ05655 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.89■□□□□ 0.29
PRKCDQ05655 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRKCDQ05655 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.89■□□□□ 0.29
PRKCDQ05655 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.89■□□□□ 0.29
PRKCDQ05655 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.89■□□□□ 0.29
PRKCDQ05655 AC008622.2-201ENST00000617006 1229 ntBASIC16.89■□□□□ 0.29
PRKCDQ05655 FAM197Y4-202ENST00000622692 608 ntBASIC16.89■□□□□ 0.29
PRKCDQ05655 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
PRKCDQ05655 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRKCDQ05655 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PRKCDQ05655 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
PRKCDQ05655 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.89■□□□□ 0.29
PRKCDQ05655 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRKCDQ05655 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRKCDQ05655 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.89■□□□□ 0.29
PRKCDQ05655 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRKCDQ05655 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.88■□□□□ 0.29
PRKCDQ05655 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRKCDQ05655 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRKCDQ05655 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRKCDQ05655 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.88■□□□□ 0.29
PRKCDQ05655 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRKCDQ05655 AC134043.2-201ENST00000624206 2238 ntBASIC16.88■□□□□ 0.29
PRKCDQ05655 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRKCDQ05655 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRKCDQ05655 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRKCDQ05655 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.88■□□□□ 0.29
PRKCDQ05655 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.88■□□□□ 0.29
PRKCDQ05655 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRKCDQ05655 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.88■□□□□ 0.29
PRKCDQ05655 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
PRKCDQ05655 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.88■□□□□ 0.29
PRKCDQ05655 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.88■□□□□ 0.29
PRKCDQ05655 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.88■□□□□ 0.29
PRKCDQ05655 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.88■□□□□ 0.29
PRKCDQ05655 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PRKCDQ05655 AC084018.2-201ENST00000613093 2607 ntBASIC16.88■□□□□ 0.29
PRKCDQ05655 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRKCDQ05655 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.88■□□□□ 0.29
PRKCDQ05655 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRKCDQ05655 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.88■□□□□ 0.29
PRKCDQ05655 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRKCDQ05655 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.88■□□□□ 0.29
PRKCDQ05655 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.88■□□□□ 0.29
PRKCDQ05655 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PRKCDQ05655 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PRKCDQ05655 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PRKCDQ05655 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.87■□□□□ 0.29
PRKCDQ05655 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRKCDQ05655 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PRKCDQ05655 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRKCDQ05655 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRKCDQ05655 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRKCDQ05655 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRKCDQ05655 AC093677.2-201ENST00000600169 1863 ntBASIC16.87■□□□□ 0.29
PRKCDQ05655 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRKCDQ05655 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRKCDQ05655 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PRKCDQ05655 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PRKCDQ05655 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
PRKCDQ05655 FAM197Y1-201ENST00000421178 764 ntBASIC16.87■□□□□ 0.29
PRKCDQ05655 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PRKCDQ05655 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.87■□□□□ 0.29
PRKCDQ05655 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.87■□□□□ 0.29
PRKCDQ05655 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.87■□□□□ 0.29
PRKCDQ05655 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.87■□□□□ 0.29
PRKCDQ05655 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRKCDQ05655 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRKCDQ05655 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.87■□□□□ 0.29
PRKCDQ05655 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRKCDQ05655 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.87■□□□□ 0.29
PRKCDQ05655 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRKCDQ05655 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRKCDQ05655 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRKCDQ05655 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.87■□□□□ 0.29
PRKCDQ05655 AL135905.2-201ENST00000584934 1404 ntBASIC16.87■□□□□ 0.29
PRKCDQ05655 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRKCDQ05655 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRKCDQ05655 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
PRKCDQ05655 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PRKCDQ05655 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
PRKCDQ05655 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PRKCDQ05655 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.86■□□□□ 0.29
PRKCDQ05655 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PRKCDQ05655 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRKCDQ05655 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms