Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ATXN3P54252 FDX1P1-201ENST00000449115 551 ntBASIC18.69■□□□□ 0.58
ATXN3P54252 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.69■□□□□ 0.58
ATXN3P54252 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
ATXN3P54252 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.69■□□□□ 0.58
ATXN3P54252 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATXN3P54252 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATXN3P54252 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.69■□□□□ 0.58
ATXN3P54252 CR769767.2-201ENST00000622735 460 ntBASIC18.69■□□□□ 0.58
ATXN3P54252 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATXN3P54252 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATXN3P54252 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATXN3P54252 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATXN3P54252 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATXN3P54252 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATXN3P54252 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ATXN3P54252 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ATXN3P54252 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATXN3P54252 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.68■□□□□ 0.58
ATXN3P54252 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATXN3P54252 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
ATXN3P54252 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.68■□□□□ 0.58
ATXN3P54252 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ATXN3P54252 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATXN3P54252 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.68■□□□□ 0.58
ATXN3P54252 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.68■□□□□ 0.58
ATXN3P54252 SPDYE13P-201ENST00000445314 798 ntBASIC18.68■□□□□ 0.58
ATXN3P54252 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.68■□□□□ 0.58
ATXN3P54252 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.68■□□□□ 0.58
ATXN3P54252 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.68■□□□□ 0.58
ATXN3P54252 LINC01711-201ENST00000598340 967 ntBASIC18.68■□□□□ 0.58
ATXN3P54252 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATXN3P54252 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.68■□□□□ 0.58
ATXN3P54252 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATXN3P54252 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ATXN3P54252 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATXN3P54252 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.68■□□□□ 0.58
ATXN3P54252 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATXN3P54252 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATXN3P54252 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATXN3P54252 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATXN3P54252 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ATXN3P54252 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATXN3P54252 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATXN3P54252 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATXN3P54252 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.67■□□□□ 0.58
ATXN3P54252 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATXN3P54252 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATXN3P54252 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATXN3P54252 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATXN3P54252 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
ATXN3P54252 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATXN3P54252 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.67■□□□□ 0.58
ATXN3P54252 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.67■□□□□ 0.58
ATXN3P54252 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATXN3P54252 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
ATXN3P54252 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.67■□□□□ 0.58
ATXN3P54252 AC092597.1-201ENST00000487352 616 ntBASIC18.67■□□□□ 0.58
ATXN3P54252 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.67■□□□□ 0.58
ATXN3P54252 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.67■□□□□ 0.58
ATXN3P54252 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATXN3P54252 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATXN3P54252 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ATXN3P54252 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATXN3P54252 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATXN3P54252 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATXN3P54252 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.67■□□□□ 0.58
ATXN3P54252 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.67■□□□□ 0.58
ATXN3P54252 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATXN3P54252 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3P54252 AL161938.1-201ENST00000569833 2180 ntBASIC18.66■□□□□ 0.58
ATXN3P54252 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.66■□□□□ 0.58
ATXN3P54252 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3P54252 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3P54252 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.66■□□□□ 0.58
ATXN3P54252 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
ATXN3P54252 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3P54252 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3P54252 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.66■□□□□ 0.58
ATXN3P54252 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.66■□□□□ 0.58
ATXN3P54252 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.66■□□□□ 0.58
ATXN3P54252 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3P54252 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3P54252 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3P54252 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.66■□□□□ 0.58
ATXN3P54252 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.66■□□□□ 0.58
ATXN3P54252 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3P54252 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
ATXN3P54252 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.66■□□□□ 0.58
ATXN3P54252 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3P54252 KRT17P6-201ENST00000453795 1220 ntBASIC18.66■□□□□ 0.58
ATXN3P54252 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
ATXN3P54252 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.66■□□□□ 0.58
ATXN3P54252 MIR4674-201ENST00000582457 87 ntBASIC18.66■□□□□ 0.58
ATXN3P54252 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.66■□□□□ 0.58
ATXN3P54252 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.66■□□□□ 0.58
ATXN3P54252 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.66■□□□□ 0.58
ATXN3P54252 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3P54252 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ATXN3P54252 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms