Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ARCN1P48444 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ARCN1P48444 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ARCN1P48444 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ARCN1P48444 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ARCN1P48444 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.34■□□□□ 0.53
ARCN1P48444 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ARCN1P48444 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.34■□□□□ 0.53
ARCN1P48444 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.34■□□□□ 0.53
ARCN1P48444 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.34■□□□□ 0.53
ARCN1P48444 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.34■□□□□ 0.53
ARCN1P48444 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.34■□□□□ 0.53
ARCN1P48444 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ARCN1P48444 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.34■□□□□ 0.53
ARCN1P48444 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ARCN1P48444 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.34■□□□□ 0.53
ARCN1P48444 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ARCN1P48444 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.34■□□□□ 0.53
ARCN1P48444 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ARCN1P48444 LINC01126-201ENST00000623515 1646 ntBASIC18.34■□□□□ 0.53
ARCN1P48444 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.34■□□□□ 0.53
ARCN1P48444 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ARCN1P48444 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ARCN1P48444 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ARCN1P48444 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ARCN1P48444 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ARCN1P48444 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ARCN1P48444 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ARCN1P48444 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ARCN1P48444 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
ARCN1P48444 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.33■□□□□ 0.53
ARCN1P48444 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ARCN1P48444 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ARCN1P48444 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.33■□□□□ 0.52
ARCN1P48444 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
ARCN1P48444 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ARCN1P48444 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ARCN1P48444 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ARCN1P48444 HMGA1P5-201ENST00000412453 271 ntBASIC18.33■□□□□ 0.52
ARCN1P48444 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ARCN1P48444 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ARCN1P48444 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ARCN1P48444 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ARCN1P48444 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ARCN1P48444 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ARCN1P48444 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ARCN1P48444 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ARCN1P48444 SEC1P-202ENST00000473944 940 ntBASIC18.33■□□□□ 0.52
ARCN1P48444 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.33■□□□□ 0.52
ARCN1P48444 AC010331.1-201ENST00000611423 582 ntBASIC18.33■□□□□ 0.52
ARCN1P48444 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ARCN1P48444 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ARCN1P48444 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
ARCN1P48444 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.33■□□□□ 0.52
ARCN1P48444 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ARCN1P48444 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ARCN1P48444 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ARCN1P48444 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ARCN1P48444 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ARCN1P48444 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ARCN1P48444 AC073508.3-201ENST00000619697 1419 ntBASIC18.32■□□□□ 0.52
ARCN1P48444 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARCN1P48444 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARCN1P48444 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARCN1P48444 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.32■□□□□ 0.52
ARCN1P48444 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ARCN1P48444 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARCN1P48444 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ARCN1P48444 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARCN1P48444 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARCN1P48444 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARCN1P48444 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ARCN1P48444 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ARCN1P48444 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.32■□□□□ 0.52
ARCN1P48444 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.32■□□□□ 0.52
ARCN1P48444 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.32■□□□□ 0.52
ARCN1P48444 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.32■□□□□ 0.52
ARCN1P48444 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.32■□□□□ 0.52
ARCN1P48444 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ARCN1P48444 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.32■□□□□ 0.52
ARCN1P48444 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARCN1P48444 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARCN1P48444 FLJ13224-201ENST00000313737 1514 ntBASIC18.32■□□□□ 0.52
ARCN1P48444 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ARCN1P48444 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.32■□□□□ 0.52
ARCN1P48444 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ARCN1P48444 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ARCN1P48444 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ARCN1P48444 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARCN1P48444 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ARCN1P48444 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARCN1P48444 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARCN1P48444 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ARCN1P48444 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.31■□□□□ 0.52
ARCN1P48444 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.31■□□□□ 0.52
ARCN1P48444 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARCN1P48444 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.31■□□□□ 0.52
ARCN1P48444 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.31■□□□□ 0.52
ARCN1P48444 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARCN1P48444 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms