Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.1■□□□□ 0.49
NELFEP18615 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NELFEP18615 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NELFEP18615 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
NELFEP18615 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NELFEP18615 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.1■□□□□ 0.49
NELFEP18615 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
NELFEP18615 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
NELFEP18615 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.1■□□□□ 0.49
NELFEP18615 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
NELFEP18615 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NELFEP18615 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NELFEP18615 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NELFEP18615 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.1■□□□□ 0.49
NELFEP18615 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.1■□□□□ 0.49
NELFEP18615 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.1■□□□□ 0.49
NELFEP18615 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.1■□□□□ 0.49
NELFEP18615 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.1■□□□□ 0.49
NELFEP18615 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
NELFEP18615 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.1■□□□□ 0.49
NELFEP18615 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
NELFEP18615 CR769767.2-201ENST00000622735 460 ntBASIC18.1■□□□□ 0.49
NELFEP18615 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NELFEP18615 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NELFEP18615 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NELFEP18615 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NELFEP18615 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NELFEP18615 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.1■□□□□ 0.49
NELFEP18615 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NELFEP18615 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NELFEP18615 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.09■□□□□ 0.49
NELFEP18615 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
NELFEP18615 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NELFEP18615 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NELFEP18615 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.09■□□□□ 0.49
NELFEP18615 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.09■□□□□ 0.49
NELFEP18615 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NELFEP18615 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NELFEP18615 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NELFEP18615 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NELFEP18615 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NELFEP18615 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
NELFEP18615 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.09■□□□□ 0.49
NELFEP18615 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NELFEP18615 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.09■□□□□ 0.49
NELFEP18615 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NELFEP18615 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.09■□□□□ 0.49
NELFEP18615 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.09■□□□□ 0.49
NELFEP18615 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NELFEP18615 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NELFEP18615 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.09■□□□□ 0.49
NELFEP18615 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NELFEP18615 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
NELFEP18615 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NELFEP18615 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.49
NELFEP18615 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.08■□□□□ 0.49
NELFEP18615 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
NELFEP18615 KRT8P3-201ENST00000519669 1449 ntBASIC18.08■□□□□ 0.49
NELFEP18615 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NELFEP18615 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NELFEP18615 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
NELFEP18615 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.08■□□□□ 0.49
NELFEP18615 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.08■□□□□ 0.49
NELFEP18615 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.08■□□□□ 0.49
NELFEP18615 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NELFEP18615 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
NELFEP18615 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.08■□□□□ 0.48
NELFEP18615 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
NELFEP18615 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NELFEP18615 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.08■□□□□ 0.48
NELFEP18615 AL359075.1-203ENST00000462729 1002 ntBASIC18.08■□□□□ 0.48
NELFEP18615 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
NELFEP18615 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
NELFEP18615 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NELFEP18615 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.08■□□□□ 0.48
NELFEP18615 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NELFEP18615 AC091076.1-201ENST00000610741 619 ntBASIC18.08■□□□□ 0.48
NELFEP18615 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.08■□□□□ 0.48
NELFEP18615 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NELFEP18615 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
NELFEP18615 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NELFEP18615 GPAT2P1-201ENST00000444924 1672 ntBASIC18.08■□□□□ 0.48
NELFEP18615 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.08■□□□□ 0.48
NELFEP18615 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NELFEP18615 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
NELFEP18615 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NELFEP18615 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NELFEP18615 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
NELFEP18615 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NELFEP18615 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NELFEP18615 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NELFEP18615 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.08■□□□□ 0.48
NELFEP18615 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NELFEP18615 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
NELFEP18615 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
NELFEP18615 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.07■□□□□ 0.48
NELFEP18615 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NELFEP18615 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.07■□□□□ 0.48
NELFEP18615 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
NELFEP18615 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms