Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 AC104417.2-201ENST00000562989 1793 ntBASIC17.13■□□□□ 0.33
TPRP12270 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TPRP12270 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.13■□□□□ 0.33
TPRP12270 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.13■□□□□ 0.33
TPRP12270 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.13■□□□□ 0.33
TPRP12270 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPRP12270 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPRP12270 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.13■□□□□ 0.33
TPRP12270 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.13■□□□□ 0.33
TPRP12270 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.13■□□□□ 0.33
TPRP12270 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.13■□□□□ 0.33
TPRP12270 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
TPRP12270 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.13■□□□□ 0.33
TPRP12270 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.13■□□□□ 0.33
TPRP12270 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPRP12270 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPRP12270 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
TPRP12270 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPRP12270 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPRP12270 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPRP12270 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPRP12270 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TPRP12270 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPRP12270 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TPRP12270 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPRP12270 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.12■□□□□ 0.33
TPRP12270 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TPRP12270 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPRP12270 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPRP12270 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.12■□□□□ 0.33
TPRP12270 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.12■□□□□ 0.33
TPRP12270 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TPRP12270 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TPRP12270 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TPRP12270 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.12■□□□□ 0.33
TPRP12270 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TPRP12270 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPRP12270 AC244015.2-201ENST00000616358 1861 ntBASIC17.12■□□□□ 0.33
TPRP12270 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.12■□□□□ 0.33
TPRP12270 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPRP12270 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
TPRP12270 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPRP12270 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.11■□□□□ 0.33
TPRP12270 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.11■□□□□ 0.33
TPRP12270 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.11■□□□□ 0.33
TPRP12270 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
TPRP12270 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TPRP12270 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPRP12270 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
TPRP12270 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.11■□□□□ 0.33
TPRP12270 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TPRP12270 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TPRP12270 LINC02560-201ENST00000596379 459 ntBASIC17.11■□□□□ 0.33
TPRP12270 AL138831.2-201ENST00000606564 490 ntBASIC17.11■□□□□ 0.33
TPRP12270 AL589182.2-201ENST00000619332 1049 ntBASIC17.11■□□□□ 0.33
TPRP12270 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPRP12270 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.11■□□□□ 0.33
TPRP12270 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TPRP12270 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TPRP12270 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.11■□□□□ 0.33
TPRP12270 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TPRP12270 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TPRP12270 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.11■□□□□ 0.33
TPRP12270 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
TPRP12270 AC026310.3-201ENST00000625186 2373 ntBASIC17.11■□□□□ 0.33
TPRP12270 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TPRP12270 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TPRP12270 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TPRP12270 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TPRP12270 AC004461.1-201ENST00000412461 403 ntBASIC17.11■□□□□ 0.33
TPRP12270 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.11■□□□□ 0.33
TPRP12270 AL596325.1-201ENST00000563991 1082 ntBASIC17.11■□□□□ 0.33
TPRP12270 MIR3180-4-201ENST00000582223 153 ntBASIC17.11■□□□□ 0.33
TPRP12270 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.11■□□□□ 0.33
TPRP12270 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPRP12270 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPRP12270 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
TPRP12270 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPRP12270 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPRP12270 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.1■□□□□ 0.33
TPRP12270 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.1■□□□□ 0.33
TPRP12270 AC067863.1-201ENST00000494933 530 ntBASIC17.1■□□□□ 0.33
TPRP12270 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPRP12270 AC006557.2-201ENST00000592985 1240 ntBASIC17.1■□□□□ 0.33
TPRP12270 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.1■□□□□ 0.33
TPRP12270 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TPRP12270 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.1■□□□□ 0.33
TPRP12270 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TPRP12270 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TPRP12270 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPRP12270 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.1■□□□□ 0.33
TPRP12270 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TPRP12270 AL109659.2-201ENST00000606809 1674 ntBASIC17.1■□□□□ 0.33
TPRP12270 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPRP12270 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPRP12270 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.1■□□□□ 0.33
TPRP12270 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TPRP12270 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TPRP12270 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TPRP12270 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms