Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DQB2P05538 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DQB2P05538 AL359075.1-203ENST00000462729 1002 ntBASIC18.58■□□□□ 0.56
HLA-DQB2P05538 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DQB2P05538 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
HLA-DQB2P05538 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
HLA-DQB2P05538 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
HLA-DQB2P05538 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
HLA-DQB2P05538 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DQB2P05538 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DQB2P05538 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.57■□□□□ 0.56
HLA-DQB2P05538 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DQB2P05538 AL096828.2-201ENST00000567259 1965 ntBASIC18.57■□□□□ 0.56
HLA-DQB2P05538 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DQB2P05538 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DQB2P05538 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.57■□□□□ 0.56
HLA-DQB2P05538 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DQB2P05538 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.57■□□□□ 0.56
HLA-DQB2P05538 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DQB2P05538 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DQB2P05538 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DQB2P05538 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DQB2P05538 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DQB2P05538 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
HLA-DQB2P05538 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
HLA-DQB2P05538 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DQB2P05538 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
HLA-DQB2P05538 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
HLA-DQB2P05538 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.57■□□□□ 0.56
HLA-DQB2P05538 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.57■□□□□ 0.56
HLA-DQB2P05538 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DQB2P05538 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
HLA-DQB2P05538 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
HLA-DQB2P05538 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DQB2P05538 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
HLA-DQB2P05538 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DQB2P05538 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
HLA-DQB2P05538 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DQB2P05538 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DQB2P05538 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DQB2P05538 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DQB2P05538 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DQB2P05538 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DQB2P05538 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DQB2P05538 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
HLA-DQB2P05538 REXO1L9P-201ENST00000604264 2108 ntBASIC18.56■□□□□ 0.56
HLA-DQB2P05538 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.56■□□□□ 0.56
HLA-DQB2P05538 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
HLA-DQB2P05538 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DQB2P05538 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DQB2P05538 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.56■□□□□ 0.56
HLA-DQB2P05538 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
HLA-DQB2P05538 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
HLA-DQB2P05538 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DQB2P05538 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DQB2P05538 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.56■□□□□ 0.56
HLA-DQB2P05538 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DQB2P05538 AC092597.1-201ENST00000487352 616 ntBASIC18.56■□□□□ 0.56
HLA-DQB2P05538 DUX4L26-201ENST00000489078 1255 ntBASIC18.56■□□□□ 0.56
HLA-DQB2P05538 AL136038.4-201ENST00000603606 1261 ntBASIC18.56■□□□□ 0.56
HLA-DQB2P05538 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
HLA-DQB2P05538 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DQB2P05538 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DQB2P05538 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DQB2P05538 AL391807.1-203ENST00000604392 2365 ntBASIC18.56■□□□□ 0.56
HLA-DQB2P05538 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
HLA-DQB2P05538 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.56■□□□□ 0.56
HLA-DQB2P05538 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DQB2P05538 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DQB2P05538 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DQB2P05538 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.56■□□□□ 0.56
HLA-DQB2P05538 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
HLA-DQB2P05538 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.55■□□□□ 0.56
HLA-DQB2P05538 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DQB2P05538 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DQB2P05538 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.55■□□□□ 0.56
HLA-DQB2P05538 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.55■□□□□ 0.56
HLA-DQB2P05538 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
HLA-DQB2P05538 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DQB2P05538 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.55■□□□□ 0.56
HLA-DQB2P05538 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DQB2P05538 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DQB2P05538 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
HLA-DQB2P05538 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HLA-DQB2P05538 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DQB2P05538 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DQB2P05538 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
HLA-DQB2P05538 HOMER2P1-201ENST00000455653 964 ntBASIC18.55■□□□□ 0.56
HLA-DQB2P05538 AC063952.2-201ENST00000498792 1227 ntBASIC18.55■□□□□ 0.56
HLA-DQB2P05538 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.55■□□□□ 0.56
HLA-DQB2P05538 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.55■□□□□ 0.56
HLA-DQB2P05538 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.55■□□□□ 0.56
HLA-DQB2P05538 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.55■□□□□ 0.56
HLA-DQB2P05538 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DQB2P05538 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.55■□□□□ 0.56
HLA-DQB2P05538 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HLA-DQB2P05538 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DQB2P05538 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
HLA-DQB2P05538 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DQB2P05538 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms