Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
TIMP1P01033 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TIMP1P01033 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TIMP1P01033 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.73■□□□□ 0.75
TIMP1P01033 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TIMP1P01033 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TIMP1P01033 MCCD1P2-201ENST00000423228 335 ntBASIC19.73■□□□□ 0.75
TIMP1P01033 KRT18P65-201ENST00000439811 1286 ntBASIC19.73■□□□□ 0.75
TIMP1P01033 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.73■□□□□ 0.75
TIMP1P01033 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.73■□□□□ 0.75
TIMP1P01033 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.73■□□□□ 0.75
TIMP1P01033 AC005829.1-201ENST00000570002 483 ntBASIC19.73■□□□□ 0.75
TIMP1P01033 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.73■□□□□ 0.75
TIMP1P01033 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TIMP1P01033 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.73■□□□□ 0.75
TIMP1P01033 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TIMP1P01033 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TIMP1P01033 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TIMP1P01033 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TIMP1P01033 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TIMP1P01033 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TIMP1P01033 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TIMP1P01033 AC099343.3-201ENST00000605834 2503 ntBASIC19.72■□□□□ 0.75
TIMP1P01033 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TIMP1P01033 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TIMP1P01033 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.72■□□□□ 0.75
TIMP1P01033 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.72■□□□□ 0.75
TIMP1P01033 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TIMP1P01033 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.72■□□□□ 0.75
TIMP1P01033 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
TIMP1P01033 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.72■□□□□ 0.75
TIMP1P01033 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TIMP1P01033 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
TIMP1P01033 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TIMP1P01033 CYMP-203ENST00000474680 1263 ntBASIC19.72■□□□□ 0.75
TIMP1P01033 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.72■□□□□ 0.75
TIMP1P01033 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
TIMP1P01033 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.72■□□□□ 0.75
TIMP1P01033 RFPL4AP1-201ENST00000530883 850 ntBASIC19.72■□□□□ 0.75
TIMP1P01033 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.72■□□□□ 0.75
TIMP1P01033 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.72■□□□□ 0.75
TIMP1P01033 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.72■□□□□ 0.75
TIMP1P01033 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.72■□□□□ 0.75
TIMP1P01033 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.72■□□□□ 0.75
TIMP1P01033 MIR1199-201ENST00000621445 119 ntBASIC19.72■□□□□ 0.75
TIMP1P01033 PGM5P2-202ENST00000637225 1043 ntBASIC19.72■□□□□ 0.75
TIMP1P01033 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
TIMP1P01033 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TIMP1P01033 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TIMP1P01033 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.72■□□□□ 0.75
TIMP1P01033 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
TIMP1P01033 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.72■□□□□ 0.75
TIMP1P01033 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TIMP1P01033 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.72■□□□□ 0.75
TIMP1P01033 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TIMP1P01033 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
TIMP1P01033 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TIMP1P01033 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TIMP1P01033 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TIMP1P01033 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.71■□□□□ 0.75
TIMP1P01033 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.71■□□□□ 0.75
TIMP1P01033 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.71■□□□□ 0.75
TIMP1P01033 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.71■□□□□ 0.75
TIMP1P01033 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TIMP1P01033 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.71■□□□□ 0.75
TIMP1P01033 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.71■□□□□ 0.75
TIMP1P01033 SNHG9-202ENST00000564014 471 ntBASIC19.71■□□□□ 0.75
TIMP1P01033 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.71■□□□□ 0.75
TIMP1P01033 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.71■□□□□ 0.75
TIMP1P01033 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.71■□□□□ 0.75
TIMP1P01033 AC005593.1-201ENST00000624894 515 ntBASIC19.71■□□□□ 0.75
TIMP1P01033 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TIMP1P01033 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TIMP1P01033 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TIMP1P01033 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TIMP1P01033 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TIMP1P01033 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TIMP1P01033 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TIMP1P01033 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TIMP1P01033 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
TIMP1P01033 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TIMP1P01033 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TIMP1P01033 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TIMP1P01033 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
TIMP1P01033 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TIMP1P01033 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TIMP1P01033 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TIMP1P01033 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TIMP1P01033 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.7■□□□□ 0.74
TIMP1P01033 KRT18P27-201ENST00000427733 1299 ntBASIC19.7■□□□□ 0.74
TIMP1P01033 YBX1P5-201ENST00000509441 847 ntBASIC19.7■□□□□ 0.74
TIMP1P01033 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
TIMP1P01033 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TIMP1P01033 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TIMP1P01033 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TIMP1P01033 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TIMP1P01033 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TIMP1P01033 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TIMP1P01033 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
TIMP1P01033 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms