Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLSTN1O94985 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.28■□□□□ 0.84
CLSTN1O94985 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLSTN1O94985 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.28■□□□□ 0.84
CLSTN1O94985 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CLSTN1O94985 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLSTN1O94985 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLSTN1O94985 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.27■□□□□ 0.84
CLSTN1O94985 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLSTN1O94985 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CLSTN1O94985 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLSTN1O94985 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLSTN1O94985 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLSTN1O94985 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLSTN1O94985 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.27■□□□□ 0.84
CLSTN1O94985 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CLSTN1O94985 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLSTN1O94985 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLSTN1O94985 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.27■□□□□ 0.84
CLSTN1O94985 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.27■□□□□ 0.84
CLSTN1O94985 ATP5G1P1-201ENST00000448724 379 ntBASIC20.27■□□□□ 0.84
CLSTN1O94985 CA15P1-201ENST00000481698 905 ntBASIC20.27■□□□□ 0.84
CLSTN1O94985 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.27■□□□□ 0.84
CLSTN1O94985 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.27■□□□□ 0.84
CLSTN1O94985 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLSTN1O94985 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.27■□□□□ 0.84
CLSTN1O94985 EGLN1P1-201ENST00000531623 762 ntBASIC20.27■□□□□ 0.84
CLSTN1O94985 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.27■□□□□ 0.84
CLSTN1O94985 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.27■□□□□ 0.84
CLSTN1O94985 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CLSTN1O94985 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CLSTN1O94985 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.27■□□□□ 0.84
CLSTN1O94985 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLSTN1O94985 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLSTN1O94985 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CLSTN1O94985 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLSTN1O94985 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC20.27■□□□□ 0.84
CLSTN1O94985 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CLSTN1O94985 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
CLSTN1O94985 KRT8P3-201ENST00000519669 1449 ntBASIC20.27■□□□□ 0.83
CLSTN1O94985 KRT18P22-201ENST00000402024 1347 ntBASIC20.27■□□□□ 0.83
CLSTN1O94985 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLSTN1O94985 AL512353.2-201ENST00000448759 1962 ntBASIC20.26■□□□□ 0.83
CLSTN1O94985 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CLSTN1O94985 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLSTN1O94985 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLSTN1O94985 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CLSTN1O94985 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLSTN1O94985 AC090164.3-201ENST00000610780 2143 ntBASIC20.26■□□□□ 0.83
CLSTN1O94985 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
CLSTN1O94985 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLSTN1O94985 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC20.26■□□□□ 0.83
CLSTN1O94985 AC007326.2-201ENST00000624224 7579 ntBASIC20.26■□□□□ 0.83
CLSTN1O94985 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.26■□□□□ 0.83
CLSTN1O94985 LIN28AP1-201ENST00000429574 405 ntBASIC20.26■□□□□ 0.83
CLSTN1O94985 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLSTN1O94985 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.26■□□□□ 0.83
CLSTN1O94985 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.26■□□□□ 0.83
CLSTN1O94985 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CLSTN1O94985 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CLSTN1O94985 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLSTN1O94985 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CLSTN1O94985 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CLSTN1O94985 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CLSTN1O94985 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLSTN1O94985 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLSTN1O94985 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CLSTN1O94985 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.26■□□□□ 0.83
CLSTN1O94985 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLSTN1O94985 GPAT2P1-201ENST00000444924 1672 ntBASIC20.26■□□□□ 0.83
CLSTN1O94985 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLSTN1O94985 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CLSTN1O94985 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLSTN1O94985 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLSTN1O94985 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLSTN1O94985 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLSTN1O94985 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CLSTN1O94985 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLSTN1O94985 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLSTN1O94985 INGX-201ENST00000359239 846 ntBASIC20.25■□□□□ 0.83
CLSTN1O94985 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.25■□□□□ 0.83
CLSTN1O94985 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLSTN1O94985 ECEL1P3-201ENST00000427961 737 ntBASIC20.25■□□□□ 0.83
CLSTN1O94985 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLSTN1O94985 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
CLSTN1O94985 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLSTN1O94985 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLSTN1O94985 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.25■□□□□ 0.83
CLSTN1O94985 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLSTN1O94985 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.25■□□□□ 0.83
CLSTN1O94985 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.25■□□□□ 0.83
CLSTN1O94985 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CLSTN1O94985 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLSTN1O94985 AC036111.1-201ENST00000533973 1582 ntBASIC20.25■□□□□ 0.83
CLSTN1O94985 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLSTN1O94985 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLSTN1O94985 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLSTN1O94985 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CLSTN1O94985 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.24■□□□□ 0.83
CLSTN1O94985 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms