Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT33AO76009 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT33AO76009 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.64■□□□□ 0.25
KRT33AO76009 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT33AO76009 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.64■□□□□ 0.25
KRT33AO76009 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
KRT33AO76009 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
KRT33AO76009 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.64■□□□□ 0.25
KRT33AO76009 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.64■□□□□ 0.25
KRT33AO76009 AC211429.1-201ENST00000415277 523 ntBASIC16.64■□□□□ 0.25
KRT33AO76009 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KRT33AO76009 MCCD1P1-208ENST00000445732 328 ntBASIC16.64■□□□□ 0.25
KRT33AO76009 ATP5G1P1-201ENST00000448724 379 ntBASIC16.64■□□□□ 0.25
KRT33AO76009 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KRT33AO76009 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.64■□□□□ 0.25
KRT33AO76009 AP003041.3-201ENST00000527151 707 ntBASIC16.64■□□□□ 0.25
KRT33AO76009 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.64■□□□□ 0.25
KRT33AO76009 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
KRT33AO76009 AC010653.2-201ENST00000623505 997 ntBASIC16.64■□□□□ 0.25
KRT33AO76009 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT33AO76009 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT33AO76009 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT33AO76009 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT33AO76009 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KRT33AO76009 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.64■□□□□ 0.25
KRT33AO76009 AL512353.2-201ENST00000448759 1962 ntBASIC16.64■□□□□ 0.25
KRT33AO76009 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
KRT33AO76009 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT33AO76009 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
KRT33AO76009 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
KRT33AO76009 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT33AO76009 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.63■□□□□ 0.25
KRT33AO76009 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.63■□□□□ 0.25
KRT33AO76009 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
KRT33AO76009 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
KRT33AO76009 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT33AO76009 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT33AO76009 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.63■□□□□ 0.25
KRT33AO76009 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT33AO76009 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT33AO76009 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT33AO76009 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT33AO76009 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
KRT33AO76009 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
KRT33AO76009 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.63■□□□□ 0.25
KRT33AO76009 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
KRT33AO76009 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT33AO76009 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
KRT33AO76009 AC007663.1-201ENST00000438948 1240 ntBASIC16.63■□□□□ 0.25
KRT33AO76009 AL512604.3-201ENST00000569583 964 ntBASIC16.63■□□□□ 0.25
KRT33AO76009 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.63■□□□□ 0.25
KRT33AO76009 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.63■□□□□ 0.25
KRT33AO76009 AC145285.6-201ENST00000604632 637 ntBASIC16.63■□□□□ 0.25
KRT33AO76009 AL023803.3-201ENST00000615559 522 ntBASIC16.63■□□□□ 0.25
KRT33AO76009 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
KRT33AO76009 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
KRT33AO76009 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
KRT33AO76009 RCC2P3-201ENST00000418112 1537 ntBASIC16.63■□□□□ 0.25
KRT33AO76009 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT33AO76009 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.63■□□□□ 0.25
KRT33AO76009 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT33AO76009 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.63■□□□□ 0.25
KRT33AO76009 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.63■□□□□ 0.25
KRT33AO76009 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.63■□□□□ 0.25
KRT33AO76009 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
KRT33AO76009 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
KRT33AO76009 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.63■□□□□ 0.25
KRT33AO76009 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
KRT33AO76009 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT33AO76009 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.63■□□□□ 0.25
KRT33AO76009 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT33AO76009 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT33AO76009 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.63■□□□□ 0.25
KRT33AO76009 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT33AO76009 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT33AO76009 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.62■□□□□ 0.25
KRT33AO76009 AC092338.2-201ENST00000568827 1415 ntBASIC16.62■□□□□ 0.25
KRT33AO76009 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT33AO76009 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT33AO76009 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT33AO76009 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT33AO76009 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.62■□□□□ 0.25
KRT33AO76009 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT33AO76009 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT33AO76009 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.62■□□□□ 0.25
KRT33AO76009 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT33AO76009 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
KRT33AO76009 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.62■□□□□ 0.25
KRT33AO76009 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT33AO76009 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT33AO76009 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT33AO76009 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT33AO76009 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
KRT33AO76009 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT33AO76009 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT33AO76009 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
KRT33AO76009 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.62■□□□□ 0.25
KRT33AO76009 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT33AO76009 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.62■□□□□ 0.25
KRT33AO76009 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms