Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT3O75175 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.77■□□□□ 0.44
CNOT3O75175 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.77■□□□□ 0.44
CNOT3O75175 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT3O75175 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.77■□□□□ 0.44
CNOT3O75175 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT3O75175 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT3O75175 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.77■□□□□ 0.44
CNOT3O75175 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.77■□□□□ 0.44
CNOT3O75175 AL358472.4-201ENST00000633140 710 ntBASIC17.77■□□□□ 0.44
CNOT3O75175 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT3O75175 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT3O75175 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CNOT3O75175 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CNOT3O75175 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNOT3O75175 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CNOT3O75175 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.77■□□□□ 0.43
CNOT3O75175 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CNOT3O75175 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.77■□□□□ 0.43
CNOT3O75175 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
CNOT3O75175 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
CNOT3O75175 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.77■□□□□ 0.43
CNOT3O75175 AC139713.2-201ENST00000641328 2723 ntBASIC17.77■□□□□ 0.43
CNOT3O75175 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT3O75175 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT3O75175 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT3O75175 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT3O75175 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.76■□□□□ 0.43
CNOT3O75175 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.76■□□□□ 0.43
CNOT3O75175 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT3O75175 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT3O75175 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.76■□□□□ 0.43
CNOT3O75175 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT3O75175 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT3O75175 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CNOT3O75175 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.76■□□□□ 0.43
CNOT3O75175 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.76■□□□□ 0.43
CNOT3O75175 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT3O75175 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT3O75175 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT3O75175 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT3O75175 AL023284.2-201ENST00000405850 579 ntBASIC17.76■□□□□ 0.43
CNOT3O75175 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.76■□□□□ 0.43
CNOT3O75175 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.76■□□□□ 0.43
CNOT3O75175 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.76■□□□□ 0.43
CNOT3O75175 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.76■□□□□ 0.43
CNOT3O75175 GCSHP2-201ENST00000560971 527 ntBASIC17.76■□□□□ 0.43
CNOT3O75175 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.76■□□□□ 0.43
CNOT3O75175 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.76■□□□□ 0.43
CNOT3O75175 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT3O75175 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CNOT3O75175 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT3O75175 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT3O75175 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CNOT3O75175 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CNOT3O75175 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CNOT3O75175 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT3O75175 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT3O75175 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT3O75175 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.76■□□□□ 0.43
CNOT3O75175 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CNOT3O75175 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNOT3O75175 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.75■□□□□ 0.43
CNOT3O75175 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNOT3O75175 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNOT3O75175 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNOT3O75175 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CNOT3O75175 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.75■□□□□ 0.43
CNOT3O75175 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CNOT3O75175 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNOT3O75175 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.75■□□□□ 0.43
CNOT3O75175 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNOT3O75175 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNOT3O75175 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CNOT3O75175 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNOT3O75175 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.75■□□□□ 0.43
CNOT3O75175 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.75■□□□□ 0.43
CNOT3O75175 HOMER2P1-201ENST00000455653 964 ntBASIC17.75■□□□□ 0.43
CNOT3O75175 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.75■□□□□ 0.43
CNOT3O75175 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.75■□□□□ 0.43
CNOT3O75175 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.75■□□□□ 0.43
CNOT3O75175 NEK4P2-201ENST00000580004 1012 ntBASIC17.75■□□□□ 0.43
CNOT3O75175 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.75■□□□□ 0.43
CNOT3O75175 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.75■□□□□ 0.43
CNOT3O75175 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNOT3O75175 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.75■□□□□ 0.43
CNOT3O75175 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNOT3O75175 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CNOT3O75175 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CNOT3O75175 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNOT3O75175 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CNOT3O75175 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
CNOT3O75175 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CNOT3O75175 PRORSD1P-202ENST00000563365 2154 ntBASIC17.74■□□□□ 0.43
CNOT3O75175 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT3O75175 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT3O75175 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CNOT3O75175 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.74■□□□□ 0.43
CNOT3O75175 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT3O75175 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms