Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LDB2O43679 YBX1P2-201ENST00000489612 999 ntBASIC18.32■□□□□ 0.52
LDB2O43679 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.32■□□□□ 0.52
LDB2O43679 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LDB2O43679 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.32■□□□□ 0.52
LDB2O43679 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.32■□□□□ 0.52
LDB2O43679 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LDB2O43679 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.32■□□□□ 0.52
LDB2O43679 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.31■□□□□ 0.52
LDB2O43679 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LDB2O43679 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.31■□□□□ 0.52
LDB2O43679 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LDB2O43679 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LDB2O43679 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LDB2O43679 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LDB2O43679 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LDB2O43679 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LDB2O43679 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
LDB2O43679 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LDB2O43679 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LDB2O43679 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LDB2O43679 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LDB2O43679 PVRIG2P-201ENST00000435460 978 ntBASIC18.31■□□□□ 0.52
LDB2O43679 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LDB2O43679 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
LDB2O43679 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LDB2O43679 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LDB2O43679 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LDB2O43679 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
LDB2O43679 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LDB2O43679 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.31■□□□□ 0.52
LDB2O43679 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
LDB2O43679 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LDB2O43679 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LDB2O43679 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LDB2O43679 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LDB2O43679 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LDB2O43679 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LDB2O43679 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.31■□□□□ 0.52
LDB2O43679 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LDB2O43679 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
LDB2O43679 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.3■□□□□ 0.52
LDB2O43679 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LDB2O43679 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LDB2O43679 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LDB2O43679 TMPOP1-202ENST00000424642 1267 ntBASIC18.3■□□□□ 0.52
LDB2O43679 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.3■□□□□ 0.52
LDB2O43679 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LDB2O43679 RASA4DP-201ENST00000460726 1199 ntBASIC18.3■□□□□ 0.52
LDB2O43679 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.3■□□□□ 0.52
LDB2O43679 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.3■□□□□ 0.52
LDB2O43679 AC006011.2-201ENST00000621313 1158 ntBASIC18.3■□□□□ 0.52
LDB2O43679 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.3■□□□□ 0.52
LDB2O43679 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LDB2O43679 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.3■□□□□ 0.52
LDB2O43679 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LDB2O43679 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.3■□□□□ 0.52
LDB2O43679 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.29■□□□□ 0.52
LDB2O43679 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
LDB2O43679 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.29■□□□□ 0.52
LDB2O43679 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LDB2O43679 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LDB2O43679 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LDB2O43679 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.29■□□□□ 0.52
LDB2O43679 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LDB2O43679 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LDB2O43679 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LDB2O43679 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.29■□□□□ 0.52
LDB2O43679 AC034232.1-201ENST00000506026 1064 ntBASIC18.29■□□□□ 0.52
LDB2O43679 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.29■□□□□ 0.52
LDB2O43679 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.29■□□□□ 0.52
LDB2O43679 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.29■□□□□ 0.52
LDB2O43679 RN7SL850P-201ENST00000579959 291 ntBASIC18.29■□□□□ 0.52
LDB2O43679 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.29■□□□□ 0.52
LDB2O43679 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.29■□□□□ 0.52
LDB2O43679 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
LDB2O43679 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LDB2O43679 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LDB2O43679 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.29■□□□□ 0.52
LDB2O43679 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LDB2O43679 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LDB2O43679 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LDB2O43679 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LDB2O43679 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.29■□□□□ 0.52
LDB2O43679 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.29■□□□□ 0.52
LDB2O43679 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LDB2O43679 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LDB2O43679 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LDB2O43679 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LDB2O43679 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LDB2O43679 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LDB2O43679 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
LDB2O43679 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.28■□□□□ 0.52
LDB2O43679 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LDB2O43679 AC138028.4-201ENST00000564984 1845 ntBASIC18.28■□□□□ 0.52
LDB2O43679 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LDB2O43679 AC093010.1-201ENST00000473625 1624 ntBASIC18.28■□□□□ 0.52
LDB2O43679 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LDB2O43679 AC020763.4-201ENST00000623414 4170 ntBASIC18.28■□□□□ 0.52
LDB2O43679 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms