Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NDUFS4O43181 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NDUFS4O43181 HTR7P1-202ENST00000624664 4411 ntBASIC17.56■□□□□ 0.4
NDUFS4O43181 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NDUFS4O43181 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDUFS4O43181 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDUFS4O43181 SDHAP2-201ENST00000455183 2001 ntBASIC17.55■□□□□ 0.4
NDUFS4O43181 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDUFS4O43181 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NDUFS4O43181 BICD1-207ENST00000551848 1962 ntBASIC17.55■□□□□ 0.4
NDUFS4O43181 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDUFS4O43181 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDUFS4O43181 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.55■□□□□ 0.4
NDUFS4O43181 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
NDUFS4O43181 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDUFS4O43181 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDUFS4O43181 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.55■□□□□ 0.4
NDUFS4O43181 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NDUFS4O43181 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDUFS4O43181 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.55■□□□□ 0.4
NDUFS4O43181 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.55■□□□□ 0.4
NDUFS4O43181 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDUFS4O43181 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.55■□□□□ 0.4
NDUFS4O43181 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
NDUFS4O43181 AC022616.7-201ENST00000525383 220 ntBASIC17.55■□□□□ 0.4
NDUFS4O43181 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDUFS4O43181 AL049597.2-201ENST00000565575 961 ntBASIC17.55■□□□□ 0.4
NDUFS4O43181 LINC01238-205ENST00000567549 1107 ntBASIC17.55■□□□□ 0.4
NDUFS4O43181 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
NDUFS4O43181 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
NDUFS4O43181 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
NDUFS4O43181 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NDUFS4O43181 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDUFS4O43181 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.55■□□□□ 0.4
NDUFS4O43181 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDUFS4O43181 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDUFS4O43181 AC135050.7-201ENST00000624508 2218 ntBASIC17.55■□□□□ 0.4
NDUFS4O43181 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.54■□□□□ 0.4
NDUFS4O43181 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NDUFS4O43181 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.54■□□□□ 0.4
NDUFS4O43181 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NDUFS4O43181 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NDUFS4O43181 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.54■□□□□ 0.4
NDUFS4O43181 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.54■□□□□ 0.4
NDUFS4O43181 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NDUFS4O43181 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.54■□□□□ 0.4
NDUFS4O43181 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NDUFS4O43181 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.54■□□□□ 0.4
NDUFS4O43181 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.54■□□□□ 0.4
NDUFS4O43181 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NDUFS4O43181 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.54■□□□□ 0.4
NDUFS4O43181 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NDUFS4O43181 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NDUFS4O43181 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NDUFS4O43181 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.54■□□□□ 0.4
NDUFS4O43181 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NDUFS4O43181 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NDUFS4O43181 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NDUFS4O43181 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NDUFS4O43181 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NDUFS4O43181 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.54■□□□□ 0.4
NDUFS4O43181 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NDUFS4O43181 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.54■□□□□ 0.4
NDUFS4O43181 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS4O43181 AC090340.1-201ENST00000620778 4980 ntBASIC17.53■□□□□ 0.4
NDUFS4O43181 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS4O43181 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.53■□□□□ 0.4
NDUFS4O43181 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NDUFS4O43181 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NDUFS4O43181 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
NDUFS4O43181 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS4O43181 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS4O43181 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS4O43181 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.53■□□□□ 0.4
NDUFS4O43181 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS4O43181 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS4O43181 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS4O43181 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS4O43181 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.53■□□□□ 0.4
NDUFS4O43181 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS4O43181 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS4O43181 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.53■□□□□ 0.4
NDUFS4O43181 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS4O43181 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NDUFS4O43181 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.53■□□□□ 0.4
NDUFS4O43181 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS4O43181 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS4O43181 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS4O43181 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS4O43181 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS4O43181 KRT18P38-201ENST00000449496 1282 ntBASIC17.53■□□□□ 0.4
NDUFS4O43181 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.53■□□□□ 0.4
NDUFS4O43181 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.53■□□□□ 0.4
NDUFS4O43181 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS4O43181 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
NDUFS4O43181 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.53■□□□□ 0.4
NDUFS4O43181 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
NDUFS4O43181 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.53■□□□□ 0.4
NDUFS4O43181 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS4O43181 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms