Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CLOCKO15516 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLOCKO15516 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.42■□□□□ 0.38
CLOCKO15516 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLOCKO15516 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
CLOCKO15516 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLOCKO15516 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CLOCKO15516 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLOCKO15516 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLOCKO15516 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
CLOCKO15516 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLOCKO15516 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.41■□□□□ 0.38
CLOCKO15516 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLOCKO15516 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLOCKO15516 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.41■□□□□ 0.38
CLOCKO15516 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.41■□□□□ 0.38
CLOCKO15516 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLOCKO15516 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.41■□□□□ 0.38
CLOCKO15516 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.41■□□□□ 0.38
CLOCKO15516 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.41■□□□□ 0.38
CLOCKO15516 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CLOCKO15516 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLOCKO15516 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLOCKO15516 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CLOCKO15516 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.41■□□□□ 0.38
CLOCKO15516 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CLOCKO15516 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CLOCKO15516 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.41■□□□□ 0.38
CLOCKO15516 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLOCKO15516 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLOCKO15516 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.41■□□□□ 0.38
CLOCKO15516 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CLOCKO15516 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CLOCKO15516 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.41■□□□□ 0.38
CLOCKO15516 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.41■□□□□ 0.38
CLOCKO15516 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.41■□□□□ 0.38
CLOCKO15516 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.41■□□□□ 0.38
CLOCKO15516 MTDHP1-201ENST00000605323 784 ntBASIC17.41■□□□□ 0.38
CLOCKO15516 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.41■□□□□ 0.38
CLOCKO15516 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLOCKO15516 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLOCKO15516 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLOCKO15516 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLOCKO15516 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLOCKO15516 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.41■□□□□ 0.38
CLOCKO15516 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CLOCKO15516 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.41■□□□□ 0.38
CLOCKO15516 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CLOCKO15516 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.41■□□□□ 0.38
CLOCKO15516 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.41■□□□□ 0.38
CLOCKO15516 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.41■□□□□ 0.38
CLOCKO15516 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CLOCKO15516 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CLOCKO15516 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLOCKO15516 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLOCKO15516 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CLOCKO15516 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLOCKO15516 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLOCKO15516 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLOCKO15516 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLOCKO15516 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLOCKO15516 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLOCKO15516 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLOCKO15516 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLOCKO15516 AC112777.1-201ENST00000540175 1423 ntBASIC17.4■□□□□ 0.38
CLOCKO15516 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLOCKO15516 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLOCKO15516 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CLOCKO15516 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLOCKO15516 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.4■□□□□ 0.38
CLOCKO15516 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLOCKO15516 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLOCKO15516 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CLOCKO15516 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.4■□□□□ 0.38
CLOCKO15516 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.4■□□□□ 0.38
CLOCKO15516 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.4■□□□□ 0.38
CLOCKO15516 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLOCKO15516 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.4■□□□□ 0.38
CLOCKO15516 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.4■□□□□ 0.38
CLOCKO15516 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.4■□□□□ 0.38
CLOCKO15516 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
CLOCKO15516 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
CLOCKO15516 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.4■□□□□ 0.38
CLOCKO15516 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLOCKO15516 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLOCKO15516 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLOCKO15516 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CLOCKO15516 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLOCKO15516 AC080080.1-201ENST00000625121 2420 ntBASIC17.4■□□□□ 0.38
CLOCKO15516 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.4■□□□□ 0.38
CLOCKO15516 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLOCKO15516 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CLOCKO15516 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.4■□□□□ 0.38
CLOCKO15516 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.4■□□□□ 0.38
CLOCKO15516 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLOCKO15516 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLOCKO15516 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLOCKO15516 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLOCKO15516 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLOCKO15516 AL645608.8-201ENST00000606034 2086 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms