Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN6O15212 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN6O15212 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN6O15212 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN6O15212 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN6O15212 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PFDN6O15212 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN6O15212 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN6O15212 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
PFDN6O15212 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN6O15212 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.35■□□□□ 0.53
PFDN6O15212 ABALON-201ENST00000629058 1903 ntBASIC18.35■□□□□ 0.53
PFDN6O15212 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PFDN6O15212 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.35■□□□□ 0.53
PFDN6O15212 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN6O15212 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN6O15212 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.35■□□□□ 0.53
PFDN6O15212 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN6O15212 GMCL1P1-201ENST00000463439 1581 ntBASIC18.35■□□□□ 0.53
PFDN6O15212 AL163051.1-201ENST00000569214 1512 ntBASIC18.35■□□□□ 0.53
PFDN6O15212 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
PFDN6O15212 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN6O15212 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN6O15212 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN6O15212 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN6O15212 AP000523.1-201ENST00000398242 1049 ntBASIC18.35■□□□□ 0.53
PFDN6O15212 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN6O15212 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.35■□□□□ 0.53
PFDN6O15212 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.35■□□□□ 0.53
PFDN6O15212 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN6O15212 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PFDN6O15212 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PFDN6O15212 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.35■□□□□ 0.53
PFDN6O15212 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.35■□□□□ 0.53
PFDN6O15212 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PFDN6O15212 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN6O15212 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN6O15212 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN6O15212 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN6O15212 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN6O15212 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN6O15212 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
PFDN6O15212 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.35■□□□□ 0.53
PFDN6O15212 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN6O15212 AL390961.4-201ENST00000623958 2535 ntBASIC18.34■□□□□ 0.53
PFDN6O15212 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
PFDN6O15212 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PFDN6O15212 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.34■□□□□ 0.53
PFDN6O15212 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PFDN6O15212 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.34■□□□□ 0.53
PFDN6O15212 AC009102.3-201ENST00000623118 1491 ntBASIC18.34■□□□□ 0.53
PFDN6O15212 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PFDN6O15212 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PFDN6O15212 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PFDN6O15212 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.34■□□□□ 0.53
PFDN6O15212 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PFDN6O15212 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PFDN6O15212 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PFDN6O15212 KRT18P22-201ENST00000402024 1347 ntBASIC18.34■□□□□ 0.53
PFDN6O15212 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PFDN6O15212 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PFDN6O15212 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PFDN6O15212 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.34■□□□□ 0.53
PFDN6O15212 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.34■□□□□ 0.53
PFDN6O15212 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PFDN6O15212 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.34■□□□□ 0.53
PFDN6O15212 AC010947.1-201ENST00000623454 693 ntBASIC18.34■□□□□ 0.53
PFDN6O15212 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PFDN6O15212 AC066615.1-201ENST00000640911 628 ntBASIC18.34■□□□□ 0.53
PFDN6O15212 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PFDN6O15212 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PFDN6O15212 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PFDN6O15212 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PFDN6O15212 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PFDN6O15212 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
PFDN6O15212 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.34■□□□□ 0.53
PFDN6O15212 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.34■□□□□ 0.53
PFDN6O15212 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PFDN6O15212 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.34■□□□□ 0.53
PFDN6O15212 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PFDN6O15212 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PFDN6O15212 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PFDN6O15212 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PFDN6O15212 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.53
PFDN6O15212 CYP2D8P-201ENST00000433633 1490 ntBASIC18.33■□□□□ 0.53
PFDN6O15212 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
PFDN6O15212 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PFDN6O15212 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.33■□□□□ 0.53
PFDN6O15212 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.33■□□□□ 0.53
PFDN6O15212 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PFDN6O15212 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PFDN6O15212 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.33■□□□□ 0.52
PFDN6O15212 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
PFDN6O15212 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PFDN6O15212 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PFDN6O15212 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.33■□□□□ 0.52
PFDN6O15212 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PFDN6O15212 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PFDN6O15212 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.33■□□□□ 0.52
PFDN6O15212 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms