Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
FOXN3O00409 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN3O00409 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN3O00409 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.62■□□□□ 0.73
FOXN3O00409 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN3O00409 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
FOXN3O00409 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN3O00409 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.62■□□□□ 0.73
FOXN3O00409 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.62■□□□□ 0.73
FOXN3O00409 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN3O00409 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.62■□□□□ 0.73
FOXN3O00409 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN3O00409 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.62■□□□□ 0.73
FOXN3O00409 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN3O00409 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN3O00409 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.62■□□□□ 0.73
FOXN3O00409 NEK4P2-201ENST00000580004 1012 ntBASIC19.62■□□□□ 0.73
FOXN3O00409 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.62■□□□□ 0.73
FOXN3O00409 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.62■□□□□ 0.73
FOXN3O00409 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN3O00409 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.62■□□□□ 0.73
FOXN3O00409 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
FOXN3O00409 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN3O00409 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN3O00409 AL024508.2-201ENST00000607749 1894 ntBASIC19.62■□□□□ 0.73
FOXN3O00409 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN3O00409 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN3O00409 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.62■□□□□ 0.73
FOXN3O00409 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN3O00409 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN3O00409 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
FOXN3O00409 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FOXN3O00409 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FOXN3O00409 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.61■□□□□ 0.73
FOXN3O00409 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.61■□□□□ 0.73
FOXN3O00409 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXN3O00409 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.61■□□□□ 0.73
FOXN3O00409 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
FOXN3O00409 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
FOXN3O00409 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.61■□□□□ 0.73
FOXN3O00409 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.61■□□□□ 0.73
FOXN3O00409 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.61■□□□□ 0.73
FOXN3O00409 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FOXN3O00409 AL138966.2-201ENST00000621997 464 ntBASIC19.61■□□□□ 0.73
FOXN3O00409 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
FOXN3O00409 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXN3O00409 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXN3O00409 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
FOXN3O00409 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXN3O00409 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FOXN3O00409 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.61■□□□□ 0.73
FOXN3O00409 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
FOXN3O00409 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXN3O00409 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN3O00409 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN3O00409 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN3O00409 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
FOXN3O00409 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.6■□□□□ 0.73
FOXN3O00409 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN3O00409 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN3O00409 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
FOXN3O00409 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN3O00409 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN3O00409 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN3O00409 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN3O00409 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN3O00409 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN3O00409 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN3O00409 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
FOXN3O00409 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN3O00409 AC009065.1-201ENST00000564055 1225 ntBASIC19.6■□□□□ 0.73
FOXN3O00409 AC141257.4-201ENST00000634557 245 ntBASIC19.6■□□□□ 0.73
FOXN3O00409 AC136944.6-201ENST00000634818 245 ntBASIC19.6■□□□□ 0.73
FOXN3O00409 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
FOXN3O00409 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN3O00409 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN3O00409 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
FOXN3O00409 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN3O00409 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.6■□□□□ 0.73
FOXN3O00409 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN3O00409 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.6■□□□□ 0.73
FOXN3O00409 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN3O00409 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN3O00409 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN3O00409 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN3O00409 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN3O00409 AP000997.3-201ENST00000623333 2250 ntBASIC19.59■□□□□ 0.73
FOXN3O00409 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.59■□□□□ 0.73
FOXN3O00409 AC026471.1-201ENST00000564629 3026 ntBASIC19.59■□□□□ 0.73
FOXN3O00409 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.59■□□□□ 0.73
FOXN3O00409 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN3O00409 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN3O00409 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN3O00409 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN3O00409 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN3O00409 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
FOXN3O00409 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN3O00409 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN3O00409 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
FOXN3O00409 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms