Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 AP000593.1-201ENST00000393668 712 ntBASIC16.98■□□□□ 0.31
TNFRSF11BO00300 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 CKBP1-201ENST00000565489 1086 ntBASIC16.98■□□□□ 0.31
TNFRSF11BO00300 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.97■□□□□ 0.31
TNFRSF11BO00300 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF11BO00300 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 AC026366.1-201ENST00000488803 879 ntBASIC16.96■□□□□ 0.31
TNFRSF11BO00300 AP002982.1-201ENST00000492365 877 ntBASIC16.96■□□□□ 0.31
TNFRSF11BO00300 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 AC104771.1-201ENST00000603335 964 ntBASIC16.96■□□□□ 0.31
TNFRSF11BO00300 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.96■□□□□ 0.31
TNFRSF11BO00300 PHGDH-209ENST00000641074 1780 ntBASIC16.96■□□□□ 0.31
TNFRSF11BO00300 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TNFRSF11BO00300 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms