Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
COLCA2A8K830 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COLCA2A8K830 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
COLCA2A8K830 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
COLCA2A8K830 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
COLCA2A8K830 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
COLCA2A8K830 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.07□□□□□ -0.16
COLCA2A8K830 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
COLCA2A8K830 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COLCA2A8K830 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14.07□□□□□ -0.16
COLCA2A8K830 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
COLCA2A8K830 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
COLCA2A8K830 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
COLCA2A8K830 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
COLCA2A8K830 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
COLCA2A8K830 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COLCA2A8K830 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COLCA2A8K830 TK2-216ENST00000564917 1156 ntTSL 3 BASIC14.07□□□□□ -0.16
COLCA2A8K830 MIR4508-201ENST00000584178 70 ntBASIC14.07□□□□□ -0.16
COLCA2A8K830 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC14.07□□□□□ -0.16
COLCA2A8K830 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
COLCA2A8K830 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
COLCA2A8K830 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COLCA2A8K830 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COLCA2A8K830 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
COLCA2A8K830 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
COLCA2A8K830 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
COLCA2A8K830 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
COLCA2A8K830 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
COLCA2A8K830 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.07□□□□□ -0.16
COLCA2A8K830 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
COLCA2A8K830 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COLCA2A8K830 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
COLCA2A8K830 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COLCA2A8K830 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.06□□□□□ -0.16
COLCA2A8K830 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COLCA2A8K830 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
COLCA2A8K830 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
COLCA2A8K830 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COLCA2A8K830 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
COLCA2A8K830 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
COLCA2A8K830 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COLCA2A8K830 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.06□□□□□ -0.16
COLCA2A8K830 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COLCA2A8K830 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COLCA2A8K830 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COLCA2A8K830 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COLCA2A8K830 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COLCA2A8K830 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
COLCA2A8K830 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COLCA2A8K830 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COLCA2A8K830 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COLCA2A8K830 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COLCA2A8K830 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
COLCA2A8K830 KRT18P60-201ENST00000312876 1297 ntBASIC14.06□□□□□ -0.16
COLCA2A8K830 HLA-G-202ENST00000376815 851 ntBASIC14.06□□□□□ -0.16
COLCA2A8K830 HLA-G-203ENST00000376818 1127 ntBASIC14.06□□□□□ -0.16
COLCA2A8K830 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC14.06□□□□□ -0.16
COLCA2A8K830 U85056.1-201ENST00000616429 682 ntBASIC14.06□□□□□ -0.16
COLCA2A8K830 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
COLCA2A8K830 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COLCA2A8K830 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
COLCA2A8K830 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
COLCA2A8K830 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COLCA2A8K830 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
COLCA2A8K830 RNF126P1-201ENST00000567452 1320 ntBASIC14.06□□□□□ -0.16
COLCA2A8K830 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
COLCA2A8K830 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.06□□□□□ -0.16
COLCA2A8K830 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COLCA2A8K830 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
COLCA2A8K830 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
COLCA2A8K830 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.06□□□□□ -0.16
COLCA2A8K830 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
COLCA2A8K830 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COLCA2A8K830 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
COLCA2A8K830 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
COLCA2A8K830 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
COLCA2A8K830 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COLCA2A8K830 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
COLCA2A8K830 FER1L4-210ENST00000615531 5998 ntBASIC14.06□□□□□ -0.16
COLCA2A8K830 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
COLCA2A8K830 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.06□□□□□ -0.16
COLCA2A8K830 AC018553.1-201ENST00000616682 1458 ntBASIC14.06□□□□□ -0.16
COLCA2A8K830 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COLCA2A8K830 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COLCA2A8K830 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC14.05□□□□□ -0.16
COLCA2A8K830 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
COLCA2A8K830 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.05□□□□□ -0.16
COLCA2A8K830 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
COLCA2A8K830 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COLCA2A8K830 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.05□□□□□ -0.16
COLCA2A8K830 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
COLCA2A8K830 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
COLCA2A8K830 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COLCA2A8K830 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
COLCA2A8K830 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
COLCA2A8K830 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.05□□□□□ -0.16
COLCA2A8K830 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
COLCA2A8K830 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COLCA2A8K830 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms