Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
C4orf47A7E2U8 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
C4orf47A7E2U8 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
C4orf47A7E2U8 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
C4orf47A7E2U8 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
C4orf47A7E2U8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
C4orf47A7E2U8 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
C4orf47A7E2U8 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.89■□□□□ 0.45
C4orf47A7E2U8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.89■□□□□ 0.45
C4orf47A7E2U8 DNAJB3-201ENST00000446806 729 ntBASIC17.89■□□□□ 0.45
C4orf47A7E2U8 AC092910.1-201ENST00000482027 1129 ntBASIC17.89■□□□□ 0.45
C4orf47A7E2U8 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.89■□□□□ 0.45
C4orf47A7E2U8 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.89■□□□□ 0.45
C4orf47A7E2U8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.89■□□□□ 0.45
C4orf47A7E2U8 AP001269.4-201ENST00000609611 512 ntBASIC17.89■□□□□ 0.45
C4orf47A7E2U8 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.89■□□□□ 0.45
C4orf47A7E2U8 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.89■□□□□ 0.45
C4orf47A7E2U8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.89■□□□□ 0.45
C4orf47A7E2U8 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
C4orf47A7E2U8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
C4orf47A7E2U8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
C4orf47A7E2U8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
C4orf47A7E2U8 KRT8P32-201ENST00000512863 1461 ntBASIC17.88■□□□□ 0.45
C4orf47A7E2U8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
C4orf47A7E2U8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
C4orf47A7E2U8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
C4orf47A7E2U8 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.88■□□□□ 0.45
C4orf47A7E2U8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
C4orf47A7E2U8 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C4orf47A7E2U8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
C4orf47A7E2U8 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.88■□□□□ 0.45
C4orf47A7E2U8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
C4orf47A7E2U8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.88■□□□□ 0.45
C4orf47A7E2U8 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.88■□□□□ 0.45
C4orf47A7E2U8 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.88■□□□□ 0.45
C4orf47A7E2U8 RPS2P1-201ENST00000434010 821 ntBASIC17.88■□□□□ 0.45
C4orf47A7E2U8 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
C4orf47A7E2U8 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C4orf47A7E2U8 AC021087.4-201ENST00000563761 564 ntBASIC17.88■□□□□ 0.45
C4orf47A7E2U8 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.88■□□□□ 0.45
C4orf47A7E2U8 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.88■□□□□ 0.45
C4orf47A7E2U8 AC134684.3-201ENST00000641758 218 ntBASIC17.88■□□□□ 0.45
C4orf47A7E2U8 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
C4orf47A7E2U8 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.88■□□□□ 0.45
C4orf47A7E2U8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C4orf47A7E2U8 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.88■□□□□ 0.45
C4orf47A7E2U8 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.88■□□□□ 0.45
C4orf47A7E2U8 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C4orf47A7E2U8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C4orf47A7E2U8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
C4orf47A7E2U8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
C4orf47A7E2U8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.88■□□□□ 0.45
C4orf47A7E2U8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.87■□□□□ 0.45
C4orf47A7E2U8 HLA-J-201ENST00000462773 1622 ntBASIC17.87■□□□□ 0.45
C4orf47A7E2U8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C4orf47A7E2U8 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
C4orf47A7E2U8 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C4orf47A7E2U8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
C4orf47A7E2U8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.87■□□□□ 0.45
C4orf47A7E2U8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
C4orf47A7E2U8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.87■□□□□ 0.45
C4orf47A7E2U8 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.87■□□□□ 0.45
C4orf47A7E2U8 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.87■□□□□ 0.45
C4orf47A7E2U8 AC040169.1-201ENST00000565382 521 ntBASIC17.87■□□□□ 0.45
C4orf47A7E2U8 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.87■□□□□ 0.45
C4orf47A7E2U8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.87■□□□□ 0.45
C4orf47A7E2U8 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.87■□□□□ 0.45
C4orf47A7E2U8 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.87■□□□□ 0.45
C4orf47A7E2U8 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
C4orf47A7E2U8 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
C4orf47A7E2U8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
C4orf47A7E2U8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
C4orf47A7E2U8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C4orf47A7E2U8 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
C4orf47A7E2U8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
C4orf47A7E2U8 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.87■□□□□ 0.45
C4orf47A7E2U8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.87■□□□□ 0.45
C4orf47A7E2U8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.87■□□□□ 0.45
C4orf47A7E2U8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.87■□□□□ 0.45
C4orf47A7E2U8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C4orf47A7E2U8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C4orf47A7E2U8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
C4orf47A7E2U8 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C4orf47A7E2U8 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C4orf47A7E2U8 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.86■□□□□ 0.45
C4orf47A7E2U8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.86■□□□□ 0.45
C4orf47A7E2U8 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
C4orf47A7E2U8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C4orf47A7E2U8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
C4orf47A7E2U8 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
C4orf47A7E2U8 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.86■□□□□ 0.45
C4orf47A7E2U8 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
C4orf47A7E2U8 Z83851.2-201ENST00000609564 659 ntBASIC17.86■□□□□ 0.45
C4orf47A7E2U8 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.86■□□□□ 0.45
C4orf47A7E2U8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C4orf47A7E2U8 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
C4orf47A7E2U8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C4orf47A7E2U8 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
C4orf47A7E2U8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
C4orf47A7E2U8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms