Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC21.28■■□□□ 1
SSC5DA1L4H1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.28■■□□□ 1
SSC5DA1L4H1 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC21.28■■□□□ 1
SSC5DA1L4H1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SSC5DA1L4H1 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SSC5DA1L4H1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SSC5DA1L4H1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SSC5DA1L4H1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC21.28■■□□□ 1
SSC5DA1L4H1 AL499627.1-201ENST00000569373 2188 ntBASIC21.28■■□□□ 1
SSC5DA1L4H1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.28■■□□□ 1
SSC5DA1L4H1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
SSC5DA1L4H1 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SSC5DA1L4H1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.28■■□□□ 1
SSC5DA1L4H1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
SSC5DA1L4H1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SSC5DA1L4H1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SSC5DA1L4H1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.27■■□□□ 1
SSC5DA1L4H1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SSC5DA1L4H1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC21.27■■□□□ 1
SSC5DA1L4H1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC21.27■■□□□ 1
SSC5DA1L4H1 AC004832.2-201ENST00000426397 482 ntBASIC21.27■■□□□ 1
SSC5DA1L4H1 KRT18P65-201ENST00000439811 1286 ntBASIC21.27■■□□□ 1
SSC5DA1L4H1 AC009947.1-201ENST00000444350 727 ntBASIC21.27■■□□□ 1
SSC5DA1L4H1 AC112482.1-201ENST00000492080 688 ntBASIC21.27■■□□□ 1
SSC5DA1L4H1 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC21.27■■□□□ 1
SSC5DA1L4H1 AC093484.2-201ENST00000580996 2166 ntBASIC21.27■■□□□ 1
SSC5DA1L4H1 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC21.27■■□□□ 1
SSC5DA1L4H1 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC21.27■■□□□ 1
SSC5DA1L4H1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SSC5DA1L4H1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SSC5DA1L4H1 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SSC5DA1L4H1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SSC5DA1L4H1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.27■■□□□ 1
SSC5DA1L4H1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
SSC5DA1L4H1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC21.27■□□□□ 0.99
SSC5DA1L4H1 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SSC5DA1L4H1 AC105339.3-201ENST00000560043 636 ntBASIC21.27■□□□□ 0.99
SSC5DA1L4H1 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SSC5DA1L4H1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC21.27■□□□□ 0.99
SSC5DA1L4H1 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
SSC5DA1L4H1 AC134684.3-201ENST00000641758 218 ntBASIC21.27■□□□□ 0.99
SSC5DA1L4H1 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC21.27■□□□□ 0.99
SSC5DA1L4H1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
SSC5DA1L4H1 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.27■□□□□ 0.99
SSC5DA1L4H1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SSC5DA1L4H1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SSC5DA1L4H1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SSC5DA1L4H1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SSC5DA1L4H1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SSC5DA1L4H1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.26■□□□□ 0.99
SSC5DA1L4H1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SSC5DA1L4H1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.26■□□□□ 0.99
SSC5DA1L4H1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SSC5DA1L4H1 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SSC5DA1L4H1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SSC5DA1L4H1 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SSC5DA1L4H1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC21.26■□□□□ 0.99
SSC5DA1L4H1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SSC5DA1L4H1 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC21.26■□□□□ 0.99
SSC5DA1L4H1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC21.26■□□□□ 0.99
SSC5DA1L4H1 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC21.26■□□□□ 0.99
SSC5DA1L4H1 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21.26■□□□□ 0.99
SSC5DA1L4H1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SSC5DA1L4H1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.26■□□□□ 0.99
SSC5DA1L4H1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SSC5DA1L4H1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SSC5DA1L4H1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SSC5DA1L4H1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.25■□□□□ 0.99
SSC5DA1L4H1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SSC5DA1L4H1 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SSC5DA1L4H1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.25■□□□□ 0.99
SSC5DA1L4H1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SSC5DA1L4H1 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
SSC5DA1L4H1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SSC5DA1L4H1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.25■□□□□ 0.99
SSC5DA1L4H1 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SSC5DA1L4H1 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC21.25■□□□□ 0.99
SSC5DA1L4H1 LAGE3P1-201ENST00000425356 484 ntBASIC21.25■□□□□ 0.99
SSC5DA1L4H1 CRCP-205ENST00000431089 942 ntTSL 2 BASIC21.25■□□□□ 0.99
SSC5DA1L4H1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SSC5DA1L4H1 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC21.25■□□□□ 0.99
SSC5DA1L4H1 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC21.25■□□□□ 0.99
SSC5DA1L4H1 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SSC5DA1L4H1 AP000867.4-201ENST00000641616 219 ntBASIC21.25■□□□□ 0.99
SSC5DA1L4H1 AC007952.6-201ENST00000573168 2673 ntBASIC21.25■□□□□ 0.99
SSC5DA1L4H1 AC003957.1-201ENST00000625108 2673 ntBASIC21.25■□□□□ 0.99
SSC5DA1L4H1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SSC5DA1L4H1 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.25■□□□□ 0.99
SSC5DA1L4H1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SSC5DA1L4H1 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SSC5DA1L4H1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
SSC5DA1L4H1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SSC5DA1L4H1 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SSC5DA1L4H1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SSC5DA1L4H1 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SSC5DA1L4H1 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SSC5DA1L4H1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
SSC5DA1L4H1 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
SSC5DA1L4H1 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC21.24■□□□□ 0.99
SSC5DA1L4H1 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms