Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC196A0A1B0GTZ2 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC196A0A1B0GTZ2 ABALON-201ENST00000629058 1903 ntBASIC21.3■■□□□ 1
CCDC196A0A1B0GTZ2 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC196A0A1B0GTZ2 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.3■■□□□ 1
CCDC196A0A1B0GTZ2 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC196A0A1B0GTZ2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC196A0A1B0GTZ2 AC092647.4-201ENST00000457211 535 ntBASIC21.3■■□□□ 1
CCDC196A0A1B0GTZ2 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.3■■□□□ 1
CCDC196A0A1B0GTZ2 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.3■■□□□ 1
CCDC196A0A1B0GTZ2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.3■■□□□ 1
CCDC196A0A1B0GTZ2 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.3■■□□□ 1
CCDC196A0A1B0GTZ2 LINC01238-205ENST00000567549 1107 ntBASIC21.3■■□□□ 1
CCDC196A0A1B0GTZ2 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.3■■□□□ 1
CCDC196A0A1B0GTZ2 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.3■■□□□ 1
CCDC196A0A1B0GTZ2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CCDC196A0A1B0GTZ2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
CCDC196A0A1B0GTZ2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCDC196A0A1B0GTZ2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.3■■□□□ 1
CCDC196A0A1B0GTZ2 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.3■■□□□ 1
CCDC196A0A1B0GTZ2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC196A0A1B0GTZ2 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CCDC196A0A1B0GTZ2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC196A0A1B0GTZ2 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC196A0A1B0GTZ2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC196A0A1B0GTZ2 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC196A0A1B0GTZ2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.29■■□□□ 1
CCDC196A0A1B0GTZ2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC196A0A1B0GTZ2 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC196A0A1B0GTZ2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.29■■□□□ 1
CCDC196A0A1B0GTZ2 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC196A0A1B0GTZ2 AC063952.2-201ENST00000498792 1227 ntBASIC21.29■■□□□ 1
CCDC196A0A1B0GTZ2 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.29■■□□□ 1
CCDC196A0A1B0GTZ2 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC196A0A1B0GTZ2 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.29■■□□□ 1
CCDC196A0A1B0GTZ2 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.29■■□□□ 1
CCDC196A0A1B0GTZ2 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.29■■□□□ 1
CCDC196A0A1B0GTZ2 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC196A0A1B0GTZ2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC196A0A1B0GTZ2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC196A0A1B0GTZ2 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CCDC196A0A1B0GTZ2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC196A0A1B0GTZ2 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 NEFHP1-201ENST00000412845 2629 ntBASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 FAM8A6P-201ENST00000407496 1135 ntBASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 SPDYE15P-201ENST00000424157 909 ntBASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 LINC01126-201ENST00000623515 1646 ntBASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 AL354751.1-201ENST00000412768 1863 ntBASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.28■■□□□ 1
CCDC196A0A1B0GTZ2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC196A0A1B0GTZ2 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC196A0A1B0GTZ2 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC196A0A1B0GTZ2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC196A0A1B0GTZ2 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC196A0A1B0GTZ2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC196A0A1B0GTZ2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC196A0A1B0GTZ2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC196A0A1B0GTZ2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC196A0A1B0GTZ2 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC196A0A1B0GTZ2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC196A0A1B0GTZ2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.27■■□□□ 1
CCDC196A0A1B0GTZ2 DUX4L26-201ENST00000489078 1255 ntBASIC21.27■■□□□ 1
CCDC196A0A1B0GTZ2 KRT18P21-201ENST00000515767 1272 ntBASIC21.27■■□□□ 1
CCDC196A0A1B0GTZ2 AL136038.4-201ENST00000603606 1261 ntBASIC21.27■■□□□ 1
CCDC196A0A1B0GTZ2 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC196A0A1B0GTZ2 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC196A0A1B0GTZ2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC196A0A1B0GTZ2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC196A0A1B0GTZ2 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.27■■□□□ 1
CCDC196A0A1B0GTZ2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CCDC196A0A1B0GTZ2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC196A0A1B0GTZ2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC196A0A1B0GTZ2 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms