Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 AC060766.5-201ENST00000590539 871 ntBASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 MYC-208ENST00000641036 567 ntBASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 RCC2P6-201ENST00000526625 1557 ntBASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 NKILA-202ENST00000614771 2598 ntBASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 AC011676.5-201ENST00000624864 2660 ntBASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 NARF-204ENST00000390006 1766 ntTSL 2 BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGKV2-28A0A075B6P5 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 NCF1B-203ENST00000435988 1254 ntBASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 GUSBP6-202ENST00000438529 1198 ntBASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGKV2-28A0A075B6P5 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms