Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 AC126763.1-201ENST00000552015 2118 ntBASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 AL024508.2-201ENST00000607749 1894 ntBASIC17.95■□□□□ 0.46
DNMT3AQ9Y6K1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
DNMT3AQ9Y6K1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 AC011498.5-201ENST00000592027 486 ntBASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 WIZP1-201ENST00000531444 2299 ntBASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DNMT3AQ9Y6K1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms