Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.77■■□□□ 1.08
CYP46A1Q9Y6A2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CYP46A1Q9Y6A2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CYP46A1Q9Y6A2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.77■■□□□ 1.08
CYP46A1Q9Y6A2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CYP46A1Q9Y6A2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CYP46A1Q9Y6A2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CYP46A1Q9Y6A2 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CYP46A1Q9Y6A2 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.77■■□□□ 1.07
CYP46A1Q9Y6A2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CYP46A1Q9Y6A2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.76■■□□□ 1.07
CYP46A1Q9Y6A2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CYP46A1Q9Y6A2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CYP46A1Q9Y6A2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.76■■□□□ 1.07
CYP46A1Q9Y6A2 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.76■■□□□ 1.07
CYP46A1Q9Y6A2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.76■■□□□ 1.07
CYP46A1Q9Y6A2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
CYP46A1Q9Y6A2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.76■■□□□ 1.07
CYP46A1Q9Y6A2 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CYP46A1Q9Y6A2 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CYP46A1Q9Y6A2 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
CYP46A1Q9Y6A2 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.76■■□□□ 1.07
CYP46A1Q9Y6A2 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CYP46A1Q9Y6A2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CYP46A1Q9Y6A2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.76■■□□□ 1.07
CYP46A1Q9Y6A2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CYP46A1Q9Y6A2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CYP46A1Q9Y6A2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.76■■□□□ 1.07
CYP46A1Q9Y6A2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CYP46A1Q9Y6A2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CYP46A1Q9Y6A2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CYP46A1Q9Y6A2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CYP46A1Q9Y6A2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CYP46A1Q9Y6A2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CYP46A1Q9Y6A2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CYP46A1Q9Y6A2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CYP46A1Q9Y6A2 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CYP46A1Q9Y6A2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CYP46A1Q9Y6A2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC21.75■■□□□ 1.07
CYP46A1Q9Y6A2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.75■■□□□ 1.07
CYP46A1Q9Y6A2 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CYP46A1Q9Y6A2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CYP46A1Q9Y6A2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CYP46A1Q9Y6A2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CYP46A1Q9Y6A2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.75■■□□□ 1.07
CYP46A1Q9Y6A2 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CYP46A1Q9Y6A2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CYP46A1Q9Y6A2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.75■■□□□ 1.07
CYP46A1Q9Y6A2 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.75■■□□□ 1.07
CYP46A1Q9Y6A2 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
CYP46A1Q9Y6A2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CYP46A1Q9Y6A2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CYP46A1Q9Y6A2 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CYP46A1Q9Y6A2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CYP46A1Q9Y6A2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.75■■□□□ 1.07
CYP46A1Q9Y6A2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CYP46A1Q9Y6A2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.75■■□□□ 1.07
CYP46A1Q9Y6A2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CYP46A1Q9Y6A2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CYP46A1Q9Y6A2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CYP46A1Q9Y6A2 BCL2-203ENST00000589955 5011 ntBASIC21.74■■□□□ 1.07
CYP46A1Q9Y6A2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CYP46A1Q9Y6A2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CYP46A1Q9Y6A2 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CYP46A1Q9Y6A2 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC21.74■■□□□ 1.07
CYP46A1Q9Y6A2 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CYP46A1Q9Y6A2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CYP46A1Q9Y6A2 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CYP46A1Q9Y6A2 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CYP46A1Q9Y6A2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CYP46A1Q9Y6A2 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CYP46A1Q9Y6A2 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CYP46A1Q9Y6A2 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.74■■□□□ 1.07
CYP46A1Q9Y6A2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.74■■□□□ 1.07
CYP46A1Q9Y6A2 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.74■■□□□ 1.07
CYP46A1Q9Y6A2 AC009065.1-201ENST00000564055 1225 ntBASIC21.74■■□□□ 1.07
CYP46A1Q9Y6A2 MIR3180-4-201ENST00000582223 153 ntBASIC21.74■■□□□ 1.07
CYP46A1Q9Y6A2 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CYP46A1Q9Y6A2 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CYP46A1Q9Y6A2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.74■■□□□ 1.07
CYP46A1Q9Y6A2 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CYP46A1Q9Y6A2 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CYP46A1Q9Y6A2 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CYP46A1Q9Y6A2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CYP46A1Q9Y6A2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.74■■□□□ 1.07
CYP46A1Q9Y6A2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
CYP46A1Q9Y6A2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CYP46A1Q9Y6A2 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CYP46A1Q9Y6A2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.73■■□□□ 1.07
CYP46A1Q9Y6A2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CYP46A1Q9Y6A2 AC026471.1-201ENST00000564629 3026 ntBASIC21.73■■□□□ 1.07
CYP46A1Q9Y6A2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CYP46A1Q9Y6A2 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CYP46A1Q9Y6A2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CYP46A1Q9Y6A2 AL596275.1-201ENST00000423464 877 ntBASIC21.73■■□□□ 1.07
CYP46A1Q9Y6A2 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CYP46A1Q9Y6A2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.73■■□□□ 1.07
CYP46A1Q9Y6A2 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CYP46A1Q9Y6A2 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.73■■□□□ 1.07
CYP46A1Q9Y6A2 ECEL1P2-202ENST00000465689 757 ntBASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms