Protein–RNA interactions for Protein: Q9Y661

HS3ST4, Heparan sulfate glucosamine 3-O-sulfotransferase 4, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST4Q9Y661 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.86■□□□□ 0.61
HS3ST4Q9Y661 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 KRT89P-201ENST00000620027 1478 ntBASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.85■□□□□ 0.61
HS3ST4Q9Y661 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 AC005332.3-201ENST00000589904 676 ntBASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 AC011498.5-201ENST00000592027 486 ntBASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 AC091076.1-201ENST00000610741 619 ntBASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HS3ST4Q9Y661 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HS3ST4Q9Y661 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HS3ST4Q9Y661 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HS3ST4Q9Y661 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.83■□□□□ 0.61
HS3ST4Q9Y661 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.83■□□□□ 0.61
HS3ST4Q9Y661 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.83■□□□□ 0.61
HS3ST4Q9Y661 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HS3ST4Q9Y661 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HS3ST4Q9Y661 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.83■□□□□ 0.61
HS3ST4Q9Y661 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HS3ST4Q9Y661 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
HS3ST4Q9Y661 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.83■□□□□ 0.6
HS3ST4Q9Y661 IGHGP-201ENST00000390555 1178 ntBASIC18.83■□□□□ 0.6
HS3ST4Q9Y661 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
HS3ST4Q9Y661 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.83■□□□□ 0.6
HS3ST4Q9Y661 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
HS3ST4Q9Y661 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HS3ST4Q9Y661 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HS3ST4Q9Y661 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HS3ST4Q9Y661 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
HS3ST4Q9Y661 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HS3ST4Q9Y661 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.83■□□□□ 0.6
HS3ST4Q9Y661 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
HS3ST4Q9Y661 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
HS3ST4Q9Y661 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.82■□□□□ 0.6
HS3ST4Q9Y661 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
HS3ST4Q9Y661 Z83836.1-201ENST00000624605 1642 ntBASIC18.82■□□□□ 0.6
HS3ST4Q9Y661 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HS3ST4Q9Y661 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HS3ST4Q9Y661 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HS3ST4Q9Y661 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HS3ST4Q9Y661 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms