Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.6■□□□□ 0.73
SNX9Q9Y5X1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX9Q9Y5X1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
SNX9Q9Y5X1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX9Q9Y5X1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX9Q9Y5X1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNX9Q9Y5X1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.6■□□□□ 0.73
SNX9Q9Y5X1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.6■□□□□ 0.73
SNX9Q9Y5X1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.6■□□□□ 0.73
SNX9Q9Y5X1 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX9Q9Y5X1 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX9Q9Y5X1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SNX9Q9Y5X1 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNX9Q9Y5X1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.6■□□□□ 0.73
SNX9Q9Y5X1 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.6■□□□□ 0.73
SNX9Q9Y5X1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SNX9Q9Y5X1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.6■□□□□ 0.73
SNX9Q9Y5X1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.6■□□□□ 0.73
SNX9Q9Y5X1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX9Q9Y5X1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX9Q9Y5X1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.6■□□□□ 0.73
SNX9Q9Y5X1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNX9Q9Y5X1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX9Q9Y5X1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNX9Q9Y5X1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.59■□□□□ 0.73
SNX9Q9Y5X1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SNX9Q9Y5X1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX9Q9Y5X1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX9Q9Y5X1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX9Q9Y5X1 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.59■□□□□ 0.73
SNX9Q9Y5X1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SNX9Q9Y5X1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX9Q9Y5X1 AL024508.2-201ENST00000607749 1894 ntBASIC19.59■□□□□ 0.73
SNX9Q9Y5X1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNX9Q9Y5X1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SNX9Q9Y5X1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.59■□□□□ 0.73
SNX9Q9Y5X1 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.59■□□□□ 0.73
SNX9Q9Y5X1 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
SNX9Q9Y5X1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.59■□□□□ 0.73
SNX9Q9Y5X1 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SNX9Q9Y5X1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.59■□□□□ 0.73
SNX9Q9Y5X1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNX9Q9Y5X1 AC073592.3-201ENST00000625118 1834 ntBASIC19.59■□□□□ 0.73
SNX9Q9Y5X1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX9Q9Y5X1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX9Q9Y5X1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.59■□□□□ 0.73
SNX9Q9Y5X1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX9Q9Y5X1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNX9Q9Y5X1 Z83836.1-201ENST00000624605 1642 ntBASIC19.58■□□□□ 0.73
SNX9Q9Y5X1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNX9Q9Y5X1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNX9Q9Y5X1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.58■□□□□ 0.73
SNX9Q9Y5X1 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNX9Q9Y5X1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNX9Q9Y5X1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
SNX9Q9Y5X1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNX9Q9Y5X1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SNX9Q9Y5X1 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
SNX9Q9Y5X1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNX9Q9Y5X1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.58■□□□□ 0.73
SNX9Q9Y5X1 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.58■□□□□ 0.73
SNX9Q9Y5X1 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.58■□□□□ 0.72
SNX9Q9Y5X1 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SNX9Q9Y5X1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.58■□□□□ 0.72
SNX9Q9Y5X1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.58■□□□□ 0.72
SNX9Q9Y5X1 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SNX9Q9Y5X1 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SNX9Q9Y5X1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
SNX9Q9Y5X1 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.58■□□□□ 0.72
SNX9Q9Y5X1 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SNX9Q9Y5X1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SNX9Q9Y5X1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.58■□□□□ 0.72
SNX9Q9Y5X1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.58■□□□□ 0.72
SNX9Q9Y5X1 AC005332.3-201ENST00000589904 676 ntBASIC19.58■□□□□ 0.72
SNX9Q9Y5X1 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SNX9Q9Y5X1 AC069148.1-201ENST00000608741 768 ntBASIC19.58■□□□□ 0.72
SNX9Q9Y5X1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
SNX9Q9Y5X1 AC093458.2-201ENST00000623150 629 ntBASIC19.58■□□□□ 0.72
SNX9Q9Y5X1 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.58■□□□□ 0.72
SNX9Q9Y5X1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNX9Q9Y5X1 AL020996.1-203ENST00000536896 2307 ntBASIC19.58■□□□□ 0.72
SNX9Q9Y5X1 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
SNX9Q9Y5X1 AL138781.2-201ENST00000617896 1843 ntBASIC19.58■□□□□ 0.72
SNX9Q9Y5X1 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNX9Q9Y5X1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX9Q9Y5X1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX9Q9Y5X1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX9Q9Y5X1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.57■□□□□ 0.72
SNX9Q9Y5X1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX9Q9Y5X1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.57■□□□□ 0.72
SNX9Q9Y5X1 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
SNX9Q9Y5X1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX9Q9Y5X1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX9Q9Y5X1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SNX9Q9Y5X1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX9Q9Y5X1 TSPY22P-201ENST00000427496 604 ntBASIC19.57■□□□□ 0.72
SNX9Q9Y5X1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNX9Q9Y5X1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.57■□□□□ 0.72
SNX9Q9Y5X1 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.57■□□□□ 0.72
SNX9Q9Y5X1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms