Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MRPS28Q9Y2Q9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
MRPS28Q9Y2Q9 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC15.83■□□□□ 0.12
MRPS28Q9Y2Q9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC15.83■□□□□ 0.12
MRPS28Q9Y2Q9 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MRPS28Q9Y2Q9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
MRPS28Q9Y2Q9 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MRPS28Q9Y2Q9 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
MRPS28Q9Y2Q9 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
MRPS28Q9Y2Q9 KRT18P6-201ENST00000555540 1265 ntBASIC15.83■□□□□ 0.12
MRPS28Q9Y2Q9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MRPS28Q9Y2Q9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC15.83■□□□□ 0.12
MRPS28Q9Y2Q9 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MRPS28Q9Y2Q9 AC006058.3-201ENST00000606217 1069 ntBASIC15.83■□□□□ 0.12
MRPS28Q9Y2Q9 AC130371.2-201ENST00000619443 611 ntBASIC15.83■□□□□ 0.12
MRPS28Q9Y2Q9 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
MRPS28Q9Y2Q9 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MRPS28Q9Y2Q9 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
MRPS28Q9Y2Q9 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MRPS28Q9Y2Q9 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MRPS28Q9Y2Q9 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MRPS28Q9Y2Q9 LINC00896-202ENST00000609602 2128 ntBASIC15.83■□□□□ 0.12
MRPS28Q9Y2Q9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.83■□□□□ 0.12
MRPS28Q9Y2Q9 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
MRPS28Q9Y2Q9 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
MRPS28Q9Y2Q9 FLJ13224-201ENST00000313737 1514 ntBASIC15.83■□□□□ 0.12
MRPS28Q9Y2Q9 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
MRPS28Q9Y2Q9 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.83■□□□□ 0.12
MRPS28Q9Y2Q9 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.83■□□□□ 0.12
MRPS28Q9Y2Q9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MRPS28Q9Y2Q9 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.83■□□□□ 0.12
MRPS28Q9Y2Q9 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 GMCL1P1-201ENST00000463439 1581 ntBASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.82■□□□□ 0.12
MRPS28Q9Y2Q9 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 MIR564-202ENST00000385049 94 ntBASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 AC011506.1-201ENST00000474329 610 ntBASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 ADM-205ENST00000528544 586 ntTSL 2 BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 C1QBPP2-201ENST00000528754 825 ntBASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 AC073195.1-201ENST00000607241 877 ntBASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 MIR6786-201ENST00000616843 113 ntBASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 AC008622.2-201ENST00000617006 1229 ntBASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms