Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 KRT8P50-201ENST00000562022 1438 ntBASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 AP000593.1-201ENST00000393668 712 ntBASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 MFAP1P1-201ENST00000442257 1255 ntBASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 SLC25A1P4-201ENST00000567977 778 ntBASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 AL096828.2-201ENST00000567259 1965 ntBASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 LINC00896-202ENST00000609602 2128 ntBASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 GMCL1P1-201ENST00000463439 1581 ntBASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP2BQ9UQN3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP2BQ9UQN3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP2BQ9UQN3 AC034236.2-201ENST00000606662 1610 ntBASIC18.67■□□□□ 0.58
CHMP2BQ9UQN3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP2BQ9UQN3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CHMP2BQ9UQN3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP2BQ9UQN3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP2BQ9UQN3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP2BQ9UQN3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
CHMP2BQ9UQN3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.67■□□□□ 0.58
CHMP2BQ9UQN3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP2BQ9UQN3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMP2BQ9UQN3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP2BQ9UQN3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP2BQ9UQN3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP2BQ9UQN3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.67■□□□□ 0.58
CHMP2BQ9UQN3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP2BQ9UQN3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMP2BQ9UQN3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMP2BQ9UQN3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.67■□□□□ 0.58
CHMP2BQ9UQN3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.67■□□□□ 0.58
CHMP2BQ9UQN3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.67■□□□□ 0.58
CHMP2BQ9UQN3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP2BQ9UQN3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CHMP2BQ9UQN3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP2BQ9UQN3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP2BQ9UQN3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP2BQ9UQN3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.67■□□□□ 0.58
CHMP2BQ9UQN3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP2BQ9UQN3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP2BQ9UQN3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms