Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 KRT8P7-201ENST00000533003 1432 ntBASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 LINC01311-201ENST00000565162 1445 ntBASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 AC020763.4-201ENST00000623414 4170 ntBASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
GTF3C4Q9UKN8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GTF3C4Q9UKN8 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GTF3C4Q9UKN8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
GTF3C4Q9UKN8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GTF3C4Q9UKN8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GTF3C4Q9UKN8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
GTF3C4Q9UKN8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GTF3C4Q9UKN8 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.75■□□□□ 0.75
GTF3C4Q9UKN8 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.75■□□□□ 0.75
GTF3C4Q9UKN8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
GTF3C4Q9UKN8 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.75■□□□□ 0.75
GTF3C4Q9UKN8 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
GTF3C4Q9UKN8 AC083849.1-201ENST00000615227 514 ntBASIC19.75■□□□□ 0.75
GTF3C4Q9UKN8 AL157888.1-201ENST00000631930 593 ntBASIC19.75■□□□□ 0.75
GTF3C4Q9UKN8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
GTF3C4Q9UKN8 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GTF3C4Q9UKN8 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
GTF3C4Q9UKN8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GTF3C4Q9UKN8 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
GTF3C4Q9UKN8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GTF3C4Q9UKN8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
GTF3C4Q9UKN8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.75■□□□□ 0.75
GTF3C4Q9UKN8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
GTF3C4Q9UKN8 ABALON-201ENST00000629058 1903 ntBASIC19.74■□□□□ 0.75
GTF3C4Q9UKN8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
GTF3C4Q9UKN8 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GTF3C4Q9UKN8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.74■□□□□ 0.75
GTF3C4Q9UKN8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
GTF3C4Q9UKN8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.74■□□□□ 0.75
GTF3C4Q9UKN8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GTF3C4Q9UKN8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
GTF3C4Q9UKN8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GTF3C4Q9UKN8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.74■□□□□ 0.75
GTF3C4Q9UKN8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GTF3C4Q9UKN8 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
GTF3C4Q9UKN8 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GTF3C4Q9UKN8 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.74■□□□□ 0.75
GTF3C4Q9UKN8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.74■□□□□ 0.75
GTF3C4Q9UKN8 AC104390.1-201ENST00000555663 520 ntBASIC19.74■□□□□ 0.75
GTF3C4Q9UKN8 MIR3917-201ENST00000580971 93 ntBASIC19.74■□□□□ 0.75
GTF3C4Q9UKN8 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GTF3C4Q9UKN8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GTF3C4Q9UKN8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GTF3C4Q9UKN8 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GTF3C4Q9UKN8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GTF3C4Q9UKN8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
GTF3C4Q9UKN8 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GTF3C4Q9UKN8 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.74■□□□□ 0.75
GTF3C4Q9UKN8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
GTF3C4Q9UKN8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
GTF3C4Q9UKN8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GTF3C4Q9UKN8 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.73■□□□□ 0.75
GTF3C4Q9UKN8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GTF3C4Q9UKN8 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
GTF3C4Q9UKN8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GTF3C4Q9UKN8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GTF3C4Q9UKN8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
GTF3C4Q9UKN8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GTF3C4Q9UKN8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GTF3C4Q9UKN8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GTF3C4Q9UKN8 PCED1CP-201ENST00000419887 785 ntBASIC19.73■□□□□ 0.75
GTF3C4Q9UKN8 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GTF3C4Q9UKN8 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.73■□□□□ 0.75
GTF3C4Q9UKN8 KRT18P41-201ENST00000518924 1277 ntBASIC19.73■□□□□ 0.75
GTF3C4Q9UKN8 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
GTF3C4Q9UKN8 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.73■□□□□ 0.75
GTF3C4Q9UKN8 ZNF444P1-201ENST00000559497 298 ntBASIC19.73■□□□□ 0.75
GTF3C4Q9UKN8 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
GTF3C4Q9UKN8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GTF3C4Q9UKN8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GTF3C4Q9UKN8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
GTF3C4Q9UKN8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GTF3C4Q9UKN8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GTF3C4Q9UKN8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GTF3C4Q9UKN8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GTF3C4Q9UKN8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.73■□□□□ 0.75
GTF3C4Q9UKN8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.73■□□□□ 0.75
GTF3C4Q9UKN8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.72■□□□□ 0.75
GTF3C4Q9UKN8 NOC2LP1-202ENST00000452600 2235 ntBASIC19.72■□□□□ 0.75
GTF3C4Q9UKN8 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
GTF3C4Q9UKN8 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
GTF3C4Q9UKN8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.72■□□□□ 0.75
GTF3C4Q9UKN8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.72■□□□□ 0.75
GTF3C4Q9UKN8 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GTF3C4Q9UKN8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
GTF3C4Q9UKN8 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
GTF3C4Q9UKN8 HBZP1-201ENST00000354915 429 ntBASIC19.72■□□□□ 0.75
GTF3C4Q9UKN8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GTF3C4Q9UKN8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GTF3C4Q9UKN8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
GTF3C4Q9UKN8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms