Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LRIT1Q9P2V4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 FDX1P1-201ENST00000449115 551 ntBASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 NSUN5P1-202ENST00000421140 1535 ntBASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 NSUN5P2-203ENST00000457352 1529 ntBASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT1Q9P2V4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 AC087289.5-201ENST00000586076 3175 ntBASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT1Q9P2V4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 MINOS1P3-201ENST00000457048 203 ntBASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 AC091607.1-201ENST00000490318 1060 ntBASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms