Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.4■□□□□ 0.86
BLOC1S4Q9NUP1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
BLOC1S4Q9NUP1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
BLOC1S4Q9NUP1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.4■□□□□ 0.86
BLOC1S4Q9NUP1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.4■□□□□ 0.86
BLOC1S4Q9NUP1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
BLOC1S4Q9NUP1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
BLOC1S4Q9NUP1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
BLOC1S4Q9NUP1 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
BLOC1S4Q9NUP1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
BLOC1S4Q9NUP1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
BLOC1S4Q9NUP1 AC093010.1-201ENST00000473625 1624 ntBASIC20.39■□□□□ 0.86
BLOC1S4Q9NUP1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
BLOC1S4Q9NUP1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BLOC1S4Q9NUP1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.39■□□□□ 0.85
BLOC1S4Q9NUP1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BLOC1S4Q9NUP1 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
BLOC1S4Q9NUP1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BLOC1S4Q9NUP1 AC092597.1-201ENST00000487352 616 ntBASIC20.39■□□□□ 0.85
BLOC1S4Q9NUP1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BLOC1S4Q9NUP1 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.39■□□□□ 0.85
BLOC1S4Q9NUP1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.39■□□□□ 0.85
BLOC1S4Q9NUP1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BLOC1S4Q9NUP1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
BLOC1S4Q9NUP1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.39■□□□□ 0.85
BLOC1S4Q9NUP1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BLOC1S4Q9NUP1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BLOC1S4Q9NUP1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
BLOC1S4Q9NUP1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.39■□□□□ 0.85
BLOC1S4Q9NUP1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
BLOC1S4Q9NUP1 AL391807.1-203ENST00000604392 2365 ntBASIC20.38■□□□□ 0.85
BLOC1S4Q9NUP1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BLOC1S4Q9NUP1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BLOC1S4Q9NUP1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BLOC1S4Q9NUP1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.38■□□□□ 0.85
BLOC1S4Q9NUP1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.38■□□□□ 0.85
BLOC1S4Q9NUP1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.38■□□□□ 0.85
BLOC1S4Q9NUP1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BLOC1S4Q9NUP1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.38■□□□□ 0.85
BLOC1S4Q9NUP1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.38■□□□□ 0.85
BLOC1S4Q9NUP1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.38■□□□□ 0.85
BLOC1S4Q9NUP1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.38■□□□□ 0.85
BLOC1S4Q9NUP1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.38■□□□□ 0.85
BLOC1S4Q9NUP1 HYMAI.1-201ENST00000620949 238 ntBASIC20.38■□□□□ 0.85
BLOC1S4Q9NUP1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.38■□□□□ 0.85
BLOC1S4Q9NUP1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BLOC1S4Q9NUP1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
BLOC1S4Q9NUP1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.38■□□□□ 0.85
BLOC1S4Q9NUP1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BLOC1S4Q9NUP1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
BLOC1S4Q9NUP1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
BLOC1S4Q9NUP1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BLOC1S4Q9NUP1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.38■□□□□ 0.85
BLOC1S4Q9NUP1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
BLOC1S4Q9NUP1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BLOC1S4Q9NUP1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
BLOC1S4Q9NUP1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BLOC1S4Q9NUP1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
BLOC1S4Q9NUP1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
BLOC1S4Q9NUP1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BLOC1S4Q9NUP1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BLOC1S4Q9NUP1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.37■□□□□ 0.85
BLOC1S4Q9NUP1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.37■□□□□ 0.85
BLOC1S4Q9NUP1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BLOC1S4Q9NUP1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BLOC1S4Q9NUP1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BLOC1S4Q9NUP1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BLOC1S4Q9NUP1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.37■□□□□ 0.85
BLOC1S4Q9NUP1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
BLOC1S4Q9NUP1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BLOC1S4Q9NUP1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
BLOC1S4Q9NUP1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.37■□□□□ 0.85
BLOC1S4Q9NUP1 HLA-F-220ENST00000434407 884 ntBASIC20.37■□□□□ 0.85
BLOC1S4Q9NUP1 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.37■□□□□ 0.85
BLOC1S4Q9NUP1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.37■□□□□ 0.85
BLOC1S4Q9NUP1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.37■□□□□ 0.85
BLOC1S4Q9NUP1 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.37■□□□□ 0.85
BLOC1S4Q9NUP1 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BLOC1S4Q9NUP1 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.37■□□□□ 0.85
BLOC1S4Q9NUP1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BLOC1S4Q9NUP1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.37■□□□□ 0.85
BLOC1S4Q9NUP1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.37■□□□□ 0.85
BLOC1S4Q9NUP1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BLOC1S4Q9NUP1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
BLOC1S4Q9NUP1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.36■□□□□ 0.85
BLOC1S4Q9NUP1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
BLOC1S4Q9NUP1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.36■□□□□ 0.85
BLOC1S4Q9NUP1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BLOC1S4Q9NUP1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BLOC1S4Q9NUP1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BLOC1S4Q9NUP1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.36■□□□□ 0.85
BLOC1S4Q9NUP1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
BLOC1S4Q9NUP1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
BLOC1S4Q9NUP1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BLOC1S4Q9NUP1 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.36■□□□□ 0.85
BLOC1S4Q9NUP1 TMPOP1-202ENST00000424642 1267 ntBASIC20.36■□□□□ 0.85
BLOC1S4Q9NUP1 AC063952.2-201ENST00000498792 1227 ntBASIC20.36■□□□□ 0.85
BLOC1S4Q9NUP1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
BLOC1S4Q9NUP1 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.36■□□□□ 0.85
BLOC1S4Q9NUP1 AL136038.4-201ENST00000603606 1261 ntBASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms