Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 HLA-L-209ENST00000420110 1011 ntBASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CDC42SE2Q9NRR3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 MNT-208ENST00000575394 606 ntTSL 4 BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 AC073195.1-201ENST00000607241 877 ntBASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 AC092666.2-201ENST00000613287 246 ntBASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 MIR6786-201ENST00000616843 113 ntBASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 AC008622.2-201ENST00000617006 1229 ntBASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 PHGDH-209ENST00000641074 1780 ntBASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CDC42SE2Q9NRR3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
CDC42SE2Q9NRR3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CDC42SE2Q9NRR3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
CDC42SE2Q9NRR3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CDC42SE2Q9NRR3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CDC42SE2Q9NRR3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 MCCD1P1-208ENST00000445732 328 ntBASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 B3GAT3P1-201ENST00000471720 806 ntBASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 AC011506.1-201ENST00000474329 610 ntBASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CDC42SE2Q9NRR3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms