Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NLRC4Q9NPP4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NLRC4Q9NPP4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.91■□□□□ 0.78
NLRC4Q9NPP4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NLRC4Q9NPP4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.91■□□□□ 0.78
NLRC4Q9NPP4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NLRC4Q9NPP4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NLRC4Q9NPP4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NLRC4Q9NPP4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NLRC4Q9NPP4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NLRC4Q9NPP4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.9■□□□□ 0.78
NLRC4Q9NPP4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NLRC4Q9NPP4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NLRC4Q9NPP4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
NLRC4Q9NPP4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.9■□□□□ 0.78
NLRC4Q9NPP4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.9■□□□□ 0.78
NLRC4Q9NPP4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NLRC4Q9NPP4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NLRC4Q9NPP4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NLRC4Q9NPP4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.9■□□□□ 0.78
NLRC4Q9NPP4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.9■□□□□ 0.78
NLRC4Q9NPP4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.9■□□□□ 0.78
NLRC4Q9NPP4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.9■□□□□ 0.78
NLRC4Q9NPP4 AL390955.1-201ENST00000428694 934 ntBASIC19.9■□□□□ 0.78
NLRC4Q9NPP4 AP003041.3-201ENST00000527151 707 ntBASIC19.9■□□□□ 0.78
NLRC4Q9NPP4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.9■□□□□ 0.78
NLRC4Q9NPP4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.9■□□□□ 0.78
NLRC4Q9NPP4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.9■□□□□ 0.78
NLRC4Q9NPP4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.9■□□□□ 0.78
NLRC4Q9NPP4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
NLRC4Q9NPP4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NLRC4Q9NPP4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NLRC4Q9NPP4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NLRC4Q9NPP4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.9■□□□□ 0.78
NLRC4Q9NPP4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NLRC4Q9NPP4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NLRC4Q9NPP4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
NLRC4Q9NPP4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NLRC4Q9NPP4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NLRC4Q9NPP4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
NLRC4Q9NPP4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.78
NLRC4Q9NPP4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NLRC4Q9NPP4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NLRC4Q9NPP4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.89■□□□□ 0.77
NLRC4Q9NPP4 UNC93B2-201ENST00000285383 730 ntBASIC19.89■□□□□ 0.77
NLRC4Q9NPP4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.89■□□□□ 0.77
NLRC4Q9NPP4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NLRC4Q9NPP4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NLRC4Q9NPP4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NLRC4Q9NPP4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
NLRC4Q9NPP4 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.89■□□□□ 0.77
NLRC4Q9NPP4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NLRC4Q9NPP4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
NLRC4Q9NPP4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
NLRC4Q9NPP4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.89■□□□□ 0.77
NLRC4Q9NPP4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.89■□□□□ 0.77
NLRC4Q9NPP4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NLRC4Q9NPP4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.89■□□□□ 0.77
NLRC4Q9NPP4 GMCL1P1-201ENST00000463439 1581 ntBASIC19.89■□□□□ 0.77
NLRC4Q9NPP4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.89■□□□□ 0.77
NLRC4Q9NPP4 AL096828.2-201ENST00000567259 1965 ntBASIC19.89■□□□□ 0.77
NLRC4Q9NPP4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.89■□□□□ 0.77
NLRC4Q9NPP4 AP000525.1-201ENST00000608286 694 ntBASIC19.89■□□□□ 0.77
NLRC4Q9NPP4 AL023803.3-201ENST00000615559 522 ntBASIC19.89■□□□□ 0.77
NLRC4Q9NPP4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.89■□□□□ 0.77
NLRC4Q9NPP4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.89■□□□□ 0.77
NLRC4Q9NPP4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
NLRC4Q9NPP4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NLRC4Q9NPP4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NLRC4Q9NPP4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NLRC4Q9NPP4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NLRC4Q9NPP4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
NLRC4Q9NPP4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NLRC4Q9NPP4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.88■□□□□ 0.77
NLRC4Q9NPP4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NLRC4Q9NPP4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NLRC4Q9NPP4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.88■□□□□ 0.77
NLRC4Q9NPP4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.88■□□□□ 0.77
NLRC4Q9NPP4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NLRC4Q9NPP4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NLRC4Q9NPP4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.88■□□□□ 0.77
NLRC4Q9NPP4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NLRC4Q9NPP4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NLRC4Q9NPP4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NLRC4Q9NPP4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.88■□□□□ 0.77
NLRC4Q9NPP4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.88■□□□□ 0.77
NLRC4Q9NPP4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NLRC4Q9NPP4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NLRC4Q9NPP4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NLRC4Q9NPP4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NLRC4Q9NPP4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
NLRC4Q9NPP4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.88■□□□□ 0.77
NLRC4Q9NPP4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
NLRC4Q9NPP4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
NLRC4Q9NPP4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.88■□□□□ 0.77
NLRC4Q9NPP4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NLRC4Q9NPP4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
NLRC4Q9NPP4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NLRC4Q9NPP4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.88■□□□□ 0.77
NLRC4Q9NPP4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms