Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GCM1Q9NP62 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.68■□□□□ 0.1
GCM1Q9NP62 TNXA-203ENST00000507684 2038 ntBASIC15.68■□□□□ 0.1
GCM1Q9NP62 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GCM1Q9NP62 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GCM1Q9NP62 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
GCM1Q9NP62 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GCM1Q9NP62 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
GCM1Q9NP62 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GCM1Q9NP62 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GCM1Q9NP62 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.68■□□□□ 0.1
GCM1Q9NP62 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GCM1Q9NP62 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GCM1Q9NP62 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
GCM1Q9NP62 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.68■□□□□ 0.1
GCM1Q9NP62 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GCM1Q9NP62 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GCM1Q9NP62 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.68■□□□□ 0.1
GCM1Q9NP62 AC104390.1-201ENST00000555663 520 ntBASIC15.68■□□□□ 0.1
GCM1Q9NP62 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.68■□□□□ 0.1
GCM1Q9NP62 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
GCM1Q9NP62 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
GCM1Q9NP62 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GCM1Q9NP62 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GCM1Q9NP62 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GCM1Q9NP62 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
GCM1Q9NP62 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
GCM1Q9NP62 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.68■□□□□ 0.1
GCM1Q9NP62 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.68■□□□□ 0.1
GCM1Q9NP62 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.68■□□□□ 0.1
GCM1Q9NP62 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GCM1Q9NP62 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
GCM1Q9NP62 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GCM1Q9NP62 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
GCM1Q9NP62 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GCM1Q9NP62 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.67■□□□□ 0.1
GCM1Q9NP62 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.67■□□□□ 0.1
GCM1Q9NP62 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GCM1Q9NP62 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GCM1Q9NP62 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GCM1Q9NP62 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GCM1Q9NP62 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GCM1Q9NP62 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GCM1Q9NP62 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.67■□□□□ 0.1
GCM1Q9NP62 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GCM1Q9NP62 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GCM1Q9NP62 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.67■□□□□ 0.1
GCM1Q9NP62 AP000593.1-201ENST00000393668 712 ntBASIC15.67■□□□□ 0.1
GCM1Q9NP62 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GCM1Q9NP62 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GCM1Q9NP62 HOMER2P1-201ENST00000455653 964 ntBASIC15.67■□□□□ 0.1
GCM1Q9NP62 AC092647.4-201ENST00000457211 535 ntBASIC15.67■□□□□ 0.1
GCM1Q9NP62 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.67■□□□□ 0.1
GCM1Q9NP62 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GCM1Q9NP62 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.67■□□□□ 0.1
GCM1Q9NP62 AC022616.7-201ENST00000525383 220 ntBASIC15.67■□□□□ 0.1
GCM1Q9NP62 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.67■□□□□ 0.1
GCM1Q9NP62 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.67■□□□□ 0.1
GCM1Q9NP62 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GCM1Q9NP62 LINC01238-205ENST00000567549 1107 ntBASIC15.67■□□□□ 0.1
GCM1Q9NP62 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.67■□□□□ 0.1
GCM1Q9NP62 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.67■□□□□ 0.1
GCM1Q9NP62 MYC-208ENST00000641036 567 ntBASIC15.67■□□□□ 0.1
GCM1Q9NP62 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GCM1Q9NP62 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GCM1Q9NP62 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GCM1Q9NP62 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
GCM1Q9NP62 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GCM1Q9NP62 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GCM1Q9NP62 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
GCM1Q9NP62 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
GCM1Q9NP62 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GCM1Q9NP62 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GCM1Q9NP62 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GCM1Q9NP62 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.66■□□□□ 0.1
GCM1Q9NP62 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
GCM1Q9NP62 AL499627.1-201ENST00000569373 2188 ntBASIC15.66■□□□□ 0.1
GCM1Q9NP62 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GCM1Q9NP62 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
GCM1Q9NP62 AC004408.2-201ENST00000623613 2777 ntBASIC15.66■□□□□ 0.1
GCM1Q9NP62 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
GCM1Q9NP62 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GCM1Q9NP62 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GCM1Q9NP62 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
GCM1Q9NP62 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GCM1Q9NP62 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
GCM1Q9NP62 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.66■□□□□ 0.1
GCM1Q9NP62 MIR1224-201ENST00000408193 85 ntBASIC15.66■□□□□ 0.1
GCM1Q9NP62 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.66■□□□□ 0.1
GCM1Q9NP62 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.66■□□□□ 0.1
GCM1Q9NP62 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GCM1Q9NP62 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GCM1Q9NP62 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.66■□□□□ 0.1
GCM1Q9NP62 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GCM1Q9NP62 AC034232.1-201ENST00000506026 1064 ntBASIC15.66■□□□□ 0.1
GCM1Q9NP62 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.66■□□□□ 0.1
GCM1Q9NP62 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.66■□□□□ 0.1
GCM1Q9NP62 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.66■□□□□ 0.1
GCM1Q9NP62 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.66■□□□□ 0.1
GCM1Q9NP62 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms