Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 AC034232.1-201ENST00000506026 1064 ntBASIC16.06■□□□□ 0.16
CDH20Q9HBT6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.06■□□□□ 0.16
CDH20Q9HBT6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDH20Q9HBT6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDH20Q9HBT6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH20Q9HBT6 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDH20Q9HBT6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH20Q9HBT6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
CDH20Q9HBT6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH20Q9HBT6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH20Q9HBT6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDH20Q9HBT6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 AC092647.4-201ENST00000457211 535 ntBASIC16.05■□□□□ 0.16
CDH20Q9HBT6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 AC104390.1-201ENST00000555663 520 ntBASIC16.05■□□□□ 0.16
CDH20Q9HBT6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.05■□□□□ 0.16
CDH20Q9HBT6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 MYLKP1-201ENST00000509077 1580 ntBASIC16.04■□□□□ 0.16
CDH20Q9HBT6 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 KRT8P50-201ENST00000562022 1438 ntBASIC16.04■□□□□ 0.16
CDH20Q9HBT6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 RNF152P1-201ENST00000397754 604 ntBASIC16.04■□□□□ 0.16
CDH20Q9HBT6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 GCSHP2-201ENST00000560971 527 ntBASIC16.04■□□□□ 0.16
CDH20Q9HBT6 LINC01238-205ENST00000567549 1107 ntBASIC16.04■□□□□ 0.16
CDH20Q9HBT6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 AC010240.3-201ENST00000607688 395 ntBASIC16.04■□□□□ 0.16
CDH20Q9HBT6 AC011558.1-201ENST00000623459 338 ntBASIC16.04■□□□□ 0.16
CDH20Q9HBT6 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CDH20Q9HBT6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms