Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DDX47Q9H0S4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX47Q9H0S4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX47Q9H0S4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX47Q9H0S4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX47Q9H0S4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX47Q9H0S4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DDX47Q9H0S4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
DDX47Q9H0S4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX47Q9H0S4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
DDX47Q9H0S4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX47Q9H0S4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DDX47Q9H0S4 AC133681.1-201ENST00000465482 601 ntBASIC19.13■□□□□ 0.65
DDX47Q9H0S4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.13■□□□□ 0.65
DDX47Q9H0S4 AL353708.3-201ENST00000610272 989 ntBASIC19.13■□□□□ 0.65
DDX47Q9H0S4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DDX47Q9H0S4 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.13■□□□□ 0.65
DDX47Q9H0S4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX47Q9H0S4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
DDX47Q9H0S4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.13■□□□□ 0.65
DDX47Q9H0S4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DDX47Q9H0S4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX47Q9H0S4 AC108860.2-201ENST00000562760 2183 ntBASIC19.13■□□□□ 0.65
DDX47Q9H0S4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
DDX47Q9H0S4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX47Q9H0S4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX47Q9H0S4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
DDX47Q9H0S4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX47Q9H0S4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX47Q9H0S4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX47Q9H0S4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX47Q9H0S4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX47Q9H0S4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX47Q9H0S4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.12■□□□□ 0.65
DDX47Q9H0S4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.12■□□□□ 0.65
DDX47Q9H0S4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
DDX47Q9H0S4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
DDX47Q9H0S4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX47Q9H0S4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
DDX47Q9H0S4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
DDX47Q9H0S4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
DDX47Q9H0S4 KSR1P1-201ENST00000446298 240 ntBASIC19.12■□□□□ 0.65
DDX47Q9H0S4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.12■□□□□ 0.65
DDX47Q9H0S4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX47Q9H0S4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX47Q9H0S4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX47Q9H0S4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX47Q9H0S4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
DDX47Q9H0S4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
DDX47Q9H0S4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
DDX47Q9H0S4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX47Q9H0S4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
DDX47Q9H0S4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.11■□□□□ 0.65
DDX47Q9H0S4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX47Q9H0S4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DDX47Q9H0S4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX47Q9H0S4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX47Q9H0S4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX47Q9H0S4 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.11■□□□□ 0.65
DDX47Q9H0S4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX47Q9H0S4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
DDX47Q9H0S4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.11■□□□□ 0.65
DDX47Q9H0S4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
DDX47Q9H0S4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DDX47Q9H0S4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX47Q9H0S4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.11■□□□□ 0.65
DDX47Q9H0S4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
DDX47Q9H0S4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX47Q9H0S4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX47Q9H0S4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DDX47Q9H0S4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX47Q9H0S4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX47Q9H0S4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX47Q9H0S4 SIRPAP1-201ENST00000448467 1770 ntBASIC19.11■□□□□ 0.65
DDX47Q9H0S4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX47Q9H0S4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
DDX47Q9H0S4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.1■□□□□ 0.65
DDX47Q9H0S4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX47Q9H0S4 KRT16P1-201ENST00000399124 1418 ntBASIC19.1■□□□□ 0.65
DDX47Q9H0S4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX47Q9H0S4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX47Q9H0S4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX47Q9H0S4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
DDX47Q9H0S4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX47Q9H0S4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
DDX47Q9H0S4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX47Q9H0S4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.1■□□□□ 0.65
DDX47Q9H0S4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.1■□□□□ 0.65
DDX47Q9H0S4 MIR564-202ENST00000385049 94 ntBASIC19.1■□□□□ 0.65
DDX47Q9H0S4 AP000593.1-201ENST00000393668 712 ntBASIC19.1■□□□□ 0.65
DDX47Q9H0S4 FAM207BP-201ENST00000447172 505 ntBASIC19.1■□□□□ 0.65
DDX47Q9H0S4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.1■□□□□ 0.65
DDX47Q9H0S4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.1■□□□□ 0.65
DDX47Q9H0S4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.1■□□□□ 0.65
DDX47Q9H0S4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX47Q9H0S4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
DDX47Q9H0S4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.1■□□□□ 0.65
DDX47Q9H0S4 AC092666.2-201ENST00000613287 246 ntBASIC19.1■□□□□ 0.65
DDX47Q9H0S4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.1■□□□□ 0.65
DDX47Q9H0S4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms