Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.75■■□□□ 1.07
NBPF3Q9H094 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
NBPF3Q9H094 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NBPF3Q9H094 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.75■■□□□ 1.07
NBPF3Q9H094 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NBPF3Q9H094 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
NBPF3Q9H094 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
NBPF3Q9H094 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
NBPF3Q9H094 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.74■■□□□ 1.07
NBPF3Q9H094 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NBPF3Q9H094 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NBPF3Q9H094 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
NBPF3Q9H094 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.74■■□□□ 1.07
NBPF3Q9H094 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NBPF3Q9H094 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NBPF3Q9H094 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NBPF3Q9H094 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NBPF3Q9H094 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.74■■□□□ 1.07
NBPF3Q9H094 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.74■■□□□ 1.07
NBPF3Q9H094 GPALPP1-207ENST00000611650 899 ntBASIC21.74■■□□□ 1.07
NBPF3Q9H094 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
NBPF3Q9H094 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
NBPF3Q9H094 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NBPF3Q9H094 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NBPF3Q9H094 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NBPF3Q9H094 AC090164.3-201ENST00000610780 2143 ntBASIC21.74■■□□□ 1.07
NBPF3Q9H094 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.74■■□□□ 1.07
NBPF3Q9H094 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
NBPF3Q9H094 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NBPF3Q9H094 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NBPF3Q9H094 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
NBPF3Q9H094 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.73■■□□□ 1.07
NBPF3Q9H094 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.73■■□□□ 1.07
NBPF3Q9H094 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
NBPF3Q9H094 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NBPF3Q9H094 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
NBPF3Q9H094 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NBPF3Q9H094 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
NBPF3Q9H094 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.73■■□□□ 1.07
NBPF3Q9H094 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.73■■□□□ 1.07
NBPF3Q9H094 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.73■■□□□ 1.07
NBPF3Q9H094 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NBPF3Q9H094 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NBPF3Q9H094 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NBPF3Q9H094 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.73■■□□□ 1.07
NBPF3Q9H094 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NBPF3Q9H094 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.72■■□□□ 1.07
NBPF3Q9H094 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.72■■□□□ 1.07
NBPF3Q9H094 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NBPF3Q9H094 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.72■■□□□ 1.07
NBPF3Q9H094 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NBPF3Q9H094 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NBPF3Q9H094 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NBPF3Q9H094 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NBPF3Q9H094 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NBPF3Q9H094 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NBPF3Q9H094 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NBPF3Q9H094 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NBPF3Q9H094 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.72■■□□□ 1.07
NBPF3Q9H094 AP000347.1-202ENST00000435868 847 ntBASIC21.72■■□□□ 1.07
NBPF3Q9H094 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.72■■□□□ 1.07
NBPF3Q9H094 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.72■■□□□ 1.07
NBPF3Q9H094 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.72■■□□□ 1.07
NBPF3Q9H094 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
NBPF3Q9H094 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.72■■□□□ 1.07
NBPF3Q9H094 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
NBPF3Q9H094 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NBPF3Q9H094 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.72■■□□□ 1.07
NBPF3Q9H094 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
NBPF3Q9H094 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.72■■□□□ 1.07
NBPF3Q9H094 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
NBPF3Q9H094 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NBPF3Q9H094 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NBPF3Q9H094 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.71■■□□□ 1.07
NBPF3Q9H094 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
NBPF3Q9H094 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NBPF3Q9H094 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NBPF3Q9H094 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NBPF3Q9H094 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NBPF3Q9H094 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NBPF3Q9H094 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
NBPF3Q9H094 MIR662-201ENST00000384847 95 ntBASIC21.71■■□□□ 1.07
NBPF3Q9H094 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.71■■□□□ 1.07
NBPF3Q9H094 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.71■■□□□ 1.07
NBPF3Q9H094 PRELID1P1-202ENST00000567272 903 ntBASIC21.71■■□□□ 1.07
NBPF3Q9H094 MIR3652-201ENST00000579335 131 ntBASIC21.71■■□□□ 1.07
NBPF3Q9H094 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.71■■□□□ 1.07
NBPF3Q9H094 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NBPF3Q9H094 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.71■■□□□ 1.07
NBPF3Q9H094 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NBPF3Q9H094 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
NBPF3Q9H094 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NBPF3Q9H094 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.71■■□□□ 1.07
NBPF3Q9H094 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.71■■□□□ 1.07
NBPF3Q9H094 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.71■■□□□ 1.07
NBPF3Q9H094 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
NBPF3Q9H094 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.71■■□□□ 1.07
NBPF3Q9H094 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NBPF3Q9H094 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
NBPF3Q9H094 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms