Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 AC023632.3-201ENST00000521633 145 ntBASIC14.89□□□□□ -0.03
NKX6-2Q9C056 TERF1P2-201ENST00000583350 1212 ntBASIC14.89□□□□□ -0.03
NKX6-2Q9C056 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 MFSD11-216ENST00000590393 1141 ntBASIC14.89□□□□□ -0.03
NKX6-2Q9C056 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 PCDHA14-201ENST00000506751 2298 ntBASIC14.89□□□□□ -0.03
NKX6-2Q9C056 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.89□□□□□ -0.03
NKX6-2Q9C056 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 NFIC-211ENST00000641145 8399 ntBASIC14.88□□□□□ -0.03
NKX6-2Q9C056 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.88□□□□□ -0.03
NKX6-2Q9C056 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NKX6-2Q9C056 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX6-2Q9C056 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms