Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDNQ99608 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.41■□□□□ 0.54
NDNQ99608 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDNQ99608 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDNQ99608 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDNQ99608 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDNQ99608 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDNQ99608 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
NDNQ99608 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDNQ99608 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NDNQ99608 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.41■□□□□ 0.54
NDNQ99608 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.41■□□□□ 0.54
NDNQ99608 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.41■□□□□ 0.54
NDNQ99608 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
NDNQ99608 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NDNQ99608 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
NDNQ99608 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NDNQ99608 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDNQ99608 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDNQ99608 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NDNQ99608 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDNQ99608 ESPNP-201ENST00000270691 2015 ntBASIC18.4■□□□□ 0.54
NDNQ99608 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
NDNQ99608 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.4■□□□□ 0.54
NDNQ99608 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.4■□□□□ 0.54
NDNQ99608 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.4■□□□□ 0.54
NDNQ99608 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
NDNQ99608 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDNQ99608 AL162741.1-201ENST00000565563 1558 ntBASIC18.4■□□□□ 0.54
NDNQ99608 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NDNQ99608 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NDNQ99608 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDNQ99608 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
NDNQ99608 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.4■□□□□ 0.54
NDNQ99608 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.4■□□□□ 0.54
NDNQ99608 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
NDNQ99608 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.4■□□□□ 0.54
NDNQ99608 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.4■□□□□ 0.54
NDNQ99608 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.4■□□□□ 0.54
NDNQ99608 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
NDNQ99608 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDNQ99608 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
NDNQ99608 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
NDNQ99608 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDNQ99608 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDNQ99608 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDNQ99608 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDNQ99608 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDNQ99608 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDNQ99608 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.4■□□□□ 0.54
NDNQ99608 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NDNQ99608 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDNQ99608 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDNQ99608 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.4■□□□□ 0.54
NDNQ99608 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NDNQ99608 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDNQ99608 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
NDNQ99608 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
NDNQ99608 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
NDNQ99608 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NDNQ99608 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.39■□□□□ 0.54
NDNQ99608 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDNQ99608 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDNQ99608 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDNQ99608 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDNQ99608 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.39■□□□□ 0.53
NDNQ99608 MIR1238-201ENST00000408483 83 ntBASIC18.39■□□□□ 0.53
NDNQ99608 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NDNQ99608 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.39■□□□□ 0.53
NDNQ99608 KRT18P41-201ENST00000518924 1277 ntBASIC18.39■□□□□ 0.53
NDNQ99608 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
NDNQ99608 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.39■□□□□ 0.53
NDNQ99608 AL355075.4-201ENST00000554988 638 ntBASIC18.39■□□□□ 0.53
NDNQ99608 MIR3180-5-201ENST00000583743 153 ntBASIC18.39■□□□□ 0.53
NDNQ99608 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.39■□□□□ 0.53
NDNQ99608 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
NDNQ99608 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.39■□□□□ 0.53
NDNQ99608 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
NDNQ99608 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDNQ99608 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
NDNQ99608 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDNQ99608 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDNQ99608 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.39■□□□□ 0.53
NDNQ99608 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDNQ99608 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.39■□□□□ 0.53
NDNQ99608 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NDNQ99608 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.38■□□□□ 0.53
NDNQ99608 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NDNQ99608 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDNQ99608 AC034236.2-201ENST00000606662 1610 ntBASIC18.38■□□□□ 0.53
NDNQ99608 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.38■□□□□ 0.53
NDNQ99608 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDNQ99608 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NDNQ99608 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NDNQ99608 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDNQ99608 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NDNQ99608 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.38■□□□□ 0.53
NDNQ99608 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDNQ99608 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.38■□□□□ 0.53
NDNQ99608 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms