Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
COL21A1Q96P44 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL21A1Q96P44 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
COL21A1Q96P44 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.36■□□□□ 0.37
COL21A1Q96P44 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.36■□□□□ 0.37
COL21A1Q96P44 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL21A1Q96P44 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL21A1Q96P44 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL21A1Q96P44 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COL21A1Q96P44 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COL21A1Q96P44 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
COL21A1Q96P44 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COL21A1Q96P44 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
COL21A1Q96P44 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.36■□□□□ 0.37
COL21A1Q96P44 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.36■□□□□ 0.37
COL21A1Q96P44 AC145285.6-201ENST00000604632 637 ntBASIC17.36■□□□□ 0.37
COL21A1Q96P44 MYC-208ENST00000641036 567 ntBASIC17.36■□□□□ 0.37
COL21A1Q96P44 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL21A1Q96P44 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
COL21A1Q96P44 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL21A1Q96P44 KRT18P22-201ENST00000402024 1347 ntBASIC17.36■□□□□ 0.37
COL21A1Q96P44 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
COL21A1Q96P44 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.36■□□□□ 0.37
COL21A1Q96P44 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL21A1Q96P44 RCC2P3-201ENST00000418112 1537 ntBASIC17.36■□□□□ 0.37
COL21A1Q96P44 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.36■□□□□ 0.37
COL21A1Q96P44 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL21A1Q96P44 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL21A1Q96P44 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL21A1Q96P44 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL21A1Q96P44 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.35■□□□□ 0.37
COL21A1Q96P44 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.35■□□□□ 0.37
COL21A1Q96P44 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL21A1Q96P44 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL21A1Q96P44 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL21A1Q96P44 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
COL21A1Q96P44 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.35■□□□□ 0.37
COL21A1Q96P44 AC007663.1-201ENST00000438948 1240 ntBASIC17.35■□□□□ 0.37
COL21A1Q96P44 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.35■□□□□ 0.37
COL21A1Q96P44 AC010653.2-201ENST00000623505 997 ntBASIC17.35■□□□□ 0.37
COL21A1Q96P44 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
COL21A1Q96P44 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.35■□□□□ 0.37
COL21A1Q96P44 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
COL21A1Q96P44 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL21A1Q96P44 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.35■□□□□ 0.37
COL21A1Q96P44 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL21A1Q96P44 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.35■□□□□ 0.37
COL21A1Q96P44 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL21A1Q96P44 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL21A1Q96P44 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL21A1Q96P44 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
COL21A1Q96P44 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
COL21A1Q96P44 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL21A1Q96P44 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL21A1Q96P44 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL21A1Q96P44 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL21A1Q96P44 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COL21A1Q96P44 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COL21A1Q96P44 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL21A1Q96P44 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
COL21A1Q96P44 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL21A1Q96P44 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
COL21A1Q96P44 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL21A1Q96P44 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.34■□□□□ 0.37
COL21A1Q96P44 AC211429.1-201ENST00000415277 523 ntBASIC17.34■□□□□ 0.37
COL21A1Q96P44 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
COL21A1Q96P44 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.34■□□□□ 0.37
COL21A1Q96P44 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COL21A1Q96P44 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.34■□□□□ 0.37
COL21A1Q96P44 ECEL1P2-202ENST00000465689 757 ntBASIC17.34■□□□□ 0.37
COL21A1Q96P44 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
COL21A1Q96P44 AP003041.3-201ENST00000527151 707 ntBASIC17.34■□□□□ 0.37
COL21A1Q96P44 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
COL21A1Q96P44 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COL21A1Q96P44 AC008622.2-201ENST00000617006 1229 ntBASIC17.34■□□□□ 0.37
COL21A1Q96P44 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.34■□□□□ 0.37
COL21A1Q96P44 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.34■□□□□ 0.37
COL21A1Q96P44 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.34■□□□□ 0.37
COL21A1Q96P44 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL21A1Q96P44 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL21A1Q96P44 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL21A1Q96P44 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.34■□□□□ 0.37
COL21A1Q96P44 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.34■□□□□ 0.37
COL21A1Q96P44 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL21A1Q96P44 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL21A1Q96P44 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COL21A1Q96P44 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COL21A1Q96P44 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
COL21A1Q96P44 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.33■□□□□ 0.37
COL21A1Q96P44 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
COL21A1Q96P44 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
COL21A1Q96P44 AC112777.1-201ENST00000540175 1423 ntBASIC17.33■□□□□ 0.36
COL21A1Q96P44 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COL21A1Q96P44 INGX-201ENST00000359239 846 ntBASIC17.33■□□□□ 0.36
COL21A1Q96P44 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.33■□□□□ 0.36
COL21A1Q96P44 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.33■□□□□ 0.36
COL21A1Q96P44 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.33■□□□□ 0.36
COL21A1Q96P44 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
COL21A1Q96P44 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.33■□□□□ 0.36
COL21A1Q96P44 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms