Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
C9orf72Q96LT7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C9orf72Q96LT7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
C9orf72Q96LT7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.92■□□□□ 0.62
C9orf72Q96LT7 PRSS44-201ENST00000515154 1146 ntBASIC18.92■□□□□ 0.62
C9orf72Q96LT7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.92■□□□□ 0.62
C9orf72Q96LT7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.92■□□□□ 0.62
C9orf72Q96LT7 CR392000.1-201ENST00000624770 1228 ntBASIC18.92■□□□□ 0.62
C9orf72Q96LT7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.92■□□□□ 0.62
C9orf72Q96LT7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C9orf72Q96LT7 AC138028.4-201ENST00000564984 1845 ntBASIC18.92■□□□□ 0.62
C9orf72Q96LT7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
C9orf72Q96LT7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C9orf72Q96LT7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
C9orf72Q96LT7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.92■□□□□ 0.62
C9orf72Q96LT7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C9orf72Q96LT7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
C9orf72Q96LT7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.92■□□□□ 0.62
C9orf72Q96LT7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C9orf72Q96LT7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
C9orf72Q96LT7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.91■□□□□ 0.62
C9orf72Q96LT7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
C9orf72Q96LT7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
C9orf72Q96LT7 RCC2P3-201ENST00000418112 1537 ntBASIC18.91■□□□□ 0.62
C9orf72Q96LT7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
C9orf72Q96LT7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
C9orf72Q96LT7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
C9orf72Q96LT7 AC004980.1-204ENST00000429707 299 ntBASIC18.91■□□□□ 0.62
C9orf72Q96LT7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.91■□□□□ 0.62
C9orf72Q96LT7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.91■□□□□ 0.62
C9orf72Q96LT7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
C9orf72Q96LT7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.91■□□□□ 0.62
C9orf72Q96LT7 AL445675.2-201ENST00000620291 557 ntBASIC18.91■□□□□ 0.62
C9orf72Q96LT7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
C9orf72Q96LT7 AC133561.5-201ENST00000635547 218 ntBASIC18.91■□□□□ 0.62
C9orf72Q96LT7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
C9orf72Q96LT7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
C9orf72Q96LT7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
C9orf72Q96LT7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
C9orf72Q96LT7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
C9orf72Q96LT7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
C9orf72Q96LT7 AC012313.1-201ENST00000593393 3059 ntBASIC18.91■□□□□ 0.62
C9orf72Q96LT7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.91■□□□□ 0.62
C9orf72Q96LT7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
C9orf72Q96LT7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
C9orf72Q96LT7 KRT16P1-201ENST00000399124 1418 ntBASIC18.91■□□□□ 0.62
C9orf72Q96LT7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
C9orf72Q96LT7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
C9orf72Q96LT7 GNAS-203ENST00000306120 1878 ntBASIC18.9■□□□□ 0.62
C9orf72Q96LT7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 AC131212.4-201ENST00000623606 975 ntBASIC18.9■□□□□ 0.62
C9orf72Q96LT7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
C9orf72Q96LT7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
C9orf72Q96LT7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
C9orf72Q96LT7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
C9orf72Q96LT7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.89■□□□□ 0.61
C9orf72Q96LT7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
C9orf72Q96LT7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
C9orf72Q96LT7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
C9orf72Q96LT7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
C9orf72Q96LT7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.89■□□□□ 0.61
C9orf72Q96LT7 AC091390.4-202ENST00000476426 537 ntBASIC18.89■□□□□ 0.61
C9orf72Q96LT7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
C9orf72Q96LT7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.89■□□□□ 0.61
C9orf72Q96LT7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
C9orf72Q96LT7 REXO1L10P-201ENST00000615707 1290 ntBASIC18.89■□□□□ 0.61
C9orf72Q96LT7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.89■□□□□ 0.61
C9orf72Q96LT7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
C9orf72Q96LT7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
C9orf72Q96LT7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms