Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RPGRIP1Q96KN7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RPGRIP1Q96KN7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPGRIP1Q96KN7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPGRIP1Q96KN7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.23■□□□□ 0.83
RPGRIP1Q96KN7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.23■□□□□ 0.83
RPGRIP1Q96KN7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.23■□□□□ 0.83
RPGRIP1Q96KN7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RPGRIP1Q96KN7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
RPGRIP1Q96KN7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.23■□□□□ 0.83
RPGRIP1Q96KN7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RPGRIP1Q96KN7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPGRIP1Q96KN7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.23■□□□□ 0.83
RPGRIP1Q96KN7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RPGRIP1Q96KN7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.23■□□□□ 0.83
RPGRIP1Q96KN7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 Z85996.1-201ENST00000494644 937 ntBASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 ZNF444P1-201ENST00000559497 298 ntBASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPGRIP1Q96KN7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.21■□□□□ 0.83
RPGRIP1Q96KN7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPGRIP1Q96KN7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RPGRIP1Q96KN7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPGRIP1Q96KN7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPGRIP1Q96KN7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPGRIP1Q96KN7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPGRIP1Q96KN7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RPGRIP1Q96KN7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.21■□□□□ 0.83
RPGRIP1Q96KN7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPGRIP1Q96KN7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.21■□□□□ 0.83
RPGRIP1Q96KN7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPGRIP1Q96KN7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
RPGRIP1Q96KN7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RPGRIP1Q96KN7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RPGRIP1Q96KN7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.21■□□□□ 0.83
RPGRIP1Q96KN7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RPGRIP1Q96KN7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.21■□□□□ 0.83
RPGRIP1Q96KN7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.21■□□□□ 0.83
RPGRIP1Q96KN7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPGRIP1Q96KN7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RPGRIP1Q96KN7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPGRIP1Q96KN7 ANO7L1-203ENST00000602586 1720 ntBASIC20.21■□□□□ 0.83
RPGRIP1Q96KN7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPGRIP1Q96KN7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RPGRIP1Q96KN7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.21■□□□□ 0.83
RPGRIP1Q96KN7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.21■□□□□ 0.83
RPGRIP1Q96KN7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPGRIP1Q96KN7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPGRIP1Q96KN7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RPGRIP1Q96KN7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RPGRIP1Q96KN7 AC138932.1-201ENST00000534164 6830 ntBASIC20.2■□□□□ 0.82
RPGRIP1Q96KN7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPGRIP1Q96KN7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RPGRIP1Q96KN7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPGRIP1Q96KN7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPGRIP1Q96KN7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPGRIP1Q96KN7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPGRIP1Q96KN7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RPGRIP1Q96KN7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPGRIP1Q96KN7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
RPGRIP1Q96KN7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.2■□□□□ 0.82
RPGRIP1Q96KN7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms