Protein–RNA interactions for Protein: Q96EP9

SLC10A4, Sodium/bile acid cotransporter 4, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC10A4Q96EP9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC10A4Q96EP9 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC10A4Q96EP9 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC10A4Q96EP9 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC21.23■□□□□ 0.99
SLC10A4Q96EP9 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC21.23■□□□□ 0.99
SLC10A4Q96EP9 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC10A4Q96EP9 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC10A4Q96EP9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC10A4Q96EP9 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SLC10A4Q96EP9 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC10A4Q96EP9 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC21.22■□□□□ 0.99
SLC10A4Q96EP9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.22■□□□□ 0.99
SLC10A4Q96EP9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC10A4Q96EP9 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.22■□□□□ 0.99
SLC10A4Q96EP9 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC10A4Q96EP9 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC10A4Q96EP9 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC10A4Q96EP9 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC10A4Q96EP9 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
SLC10A4Q96EP9 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC10A4Q96EP9 AC004832.2-201ENST00000426397 482 ntBASIC21.22■□□□□ 0.99
SLC10A4Q96EP9 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC21.22■□□□□ 0.99
SLC10A4Q96EP9 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC21.22■□□□□ 0.99
SLC10A4Q96EP9 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21.22■□□□□ 0.99
SLC10A4Q96EP9 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
SLC10A4Q96EP9 NKAPP1-205ENST00000585790 367 ntBASIC21.22■□□□□ 0.99
SLC10A4Q96EP9 MTDHP4-201ENST00000600287 670 ntBASIC21.22■□□□□ 0.99
SLC10A4Q96EP9 AL139288.1-201ENST00000623748 933 ntBASIC21.22■□□□□ 0.99
SLC10A4Q96EP9 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
SLC10A4Q96EP9 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC10A4Q96EP9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.22■□□□□ 0.99
SLC10A4Q96EP9 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.22■□□□□ 0.99
SLC10A4Q96EP9 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.22■□□□□ 0.99
SLC10A4Q96EP9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC10A4Q96EP9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC10A4Q96EP9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SLC10A4Q96EP9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SLC10A4Q96EP9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.21■□□□□ 0.99
SLC10A4Q96EP9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SLC10A4Q96EP9 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC10A4Q96EP9 AC007967.2-201ENST00000432613 625 ntBASIC21.21■□□□□ 0.99
SLC10A4Q96EP9 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SLC10A4Q96EP9 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SLC10A4Q96EP9 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SLC10A4Q96EP9 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC21.21■□□□□ 0.99
SLC10A4Q96EP9 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.21■□□□□ 0.99
SLC10A4Q96EP9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.21■□□□□ 0.99
SLC10A4Q96EP9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC10A4Q96EP9 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC10A4Q96EP9 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC10A4Q96EP9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.21■□□□□ 0.99
SLC10A4Q96EP9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC10A4Q96EP9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
SLC10A4Q96EP9 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SLC10A4Q96EP9 AC099343.3-201ENST00000605834 2503 ntBASIC21.2■□□□□ 0.98
SLC10A4Q96EP9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SLC10A4Q96EP9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC10A4Q96EP9 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC10A4Q96EP9 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC10A4Q96EP9 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC21.2■□□□□ 0.98
SLC10A4Q96EP9 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC21.2■□□□□ 0.98
SLC10A4Q96EP9 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC21.2■□□□□ 0.98
SLC10A4Q96EP9 RPS15-207ENST00000591032 550 ntTSL 3 BASIC21.2■□□□□ 0.98
SLC10A4Q96EP9 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC21.2■□□□□ 0.98
SLC10A4Q96EP9 AC107918.4-202ENST00000641623 219 ntBASIC21.2■□□□□ 0.98
SLC10A4Q96EP9 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC10A4Q96EP9 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC10A4Q96EP9 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC10A4Q96EP9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC10A4Q96EP9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC10A4Q96EP9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC10A4Q96EP9 AP002414.3-201ENST00000589352 1468 ntBASIC21.2■□□□□ 0.98
SLC10A4Q96EP9 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC10A4Q96EP9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SLC10A4Q96EP9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC10A4Q96EP9 AL157384.1-201ENST00000445995 2473 ntBASIC21.19■□□□□ 0.98
SLC10A4Q96EP9 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SLC10A4Q96EP9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC10A4Q96EP9 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SLC10A4Q96EP9 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SLC10A4Q96EP9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.19■□□□□ 0.98
SLC10A4Q96EP9 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC10A4Q96EP9 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC10A4Q96EP9 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC10A4Q96EP9 SOD2-201ENST00000337404 991 ntTSL 2 BASIC21.19■□□□□ 0.98
SLC10A4Q96EP9 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC10A4Q96EP9 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC10A4Q96EP9 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC10A4Q96EP9 COA5-202ENST00000409997 557 ntTSL 4 BASIC21.19■□□□□ 0.98
SLC10A4Q96EP9 AC023274.1-201ENST00000418278 595 ntBASIC21.19■□□□□ 0.98
SLC10A4Q96EP9 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC21.19■□□□□ 0.98
SLC10A4Q96EP9 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC21.19■□□□□ 0.98
SLC10A4Q96EP9 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SLC10A4Q96EP9 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC21.19■□□□□ 0.98
SLC10A4Q96EP9 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC21.19■□□□□ 0.98
SLC10A4Q96EP9 AC002347.1-201ENST00000569543 541 ntBASIC21.19■□□□□ 0.98
SLC10A4Q96EP9 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SLC10A4Q96EP9 MTDHP5-201ENST00000598980 586 ntBASIC21.19■□□□□ 0.98
SLC10A4Q96EP9 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC21.19■□□□□ 0.98
SLC10A4Q96EP9 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms