Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.46■□□□□ 0.23
CPNE4Q96A23 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE4Q96A23 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE4Q96A23 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE4Q96A23 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE4Q96A23 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE4Q96A23 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE4Q96A23 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.46■□□□□ 0.23
CPNE4Q96A23 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.46■□□□□ 0.23
CPNE4Q96A23 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.46■□□□□ 0.23
CPNE4Q96A23 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.46■□□□□ 0.23
CPNE4Q96A23 ZNF444P1-201ENST00000559497 298 ntBASIC16.46■□□□□ 0.23
CPNE4Q96A23 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.46■□□□□ 0.23
CPNE4Q96A23 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.46■□□□□ 0.23
CPNE4Q96A23 HYMAI.1-201ENST00000620949 238 ntBASIC16.46■□□□□ 0.23
CPNE4Q96A23 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.46■□□□□ 0.23
CPNE4Q96A23 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.46■□□□□ 0.23
CPNE4Q96A23 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE4Q96A23 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CPNE4Q96A23 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CPNE4Q96A23 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE4Q96A23 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE4Q96A23 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.46■□□□□ 0.23
CPNE4Q96A23 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CPNE4Q96A23 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE4Q96A23 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE4Q96A23 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.46■□□□□ 0.23
CPNE4Q96A23 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE4Q96A23 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE4Q96A23 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CPNE4Q96A23 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CPNE4Q96A23 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CPNE4Q96A23 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CPNE4Q96A23 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.46■□□□□ 0.22
CPNE4Q96A23 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CPNE4Q96A23 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CPNE4Q96A23 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
CPNE4Q96A23 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE4Q96A23 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CPNE4Q96A23 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.45■□□□□ 0.22
CPNE4Q96A23 AL391807.1-203ENST00000604392 2365 ntBASIC16.45■□□□□ 0.22
CPNE4Q96A23 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.45■□□□□ 0.22
CPNE4Q96A23 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
CPNE4Q96A23 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CPNE4Q96A23 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE4Q96A23 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE4Q96A23 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
CPNE4Q96A23 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CPNE4Q96A23 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE4Q96A23 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE4Q96A23 HLA-F-220ENST00000434407 884 ntBASIC16.45■□□□□ 0.22
CPNE4Q96A23 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE4Q96A23 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.45■□□□□ 0.22
CPNE4Q96A23 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.45■□□□□ 0.22
CPNE4Q96A23 AC008687.5-201ENST00000593746 558 ntBASIC16.45■□□□□ 0.22
CPNE4Q96A23 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.45■□□□□ 0.22
CPNE4Q96A23 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
CPNE4Q96A23 AC083849.1-201ENST00000615227 514 ntBASIC16.45■□□□□ 0.22
CPNE4Q96A23 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.45■□□□□ 0.22
CPNE4Q96A23 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE4Q96A23 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.45■□□□□ 0.22
CPNE4Q96A23 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE4Q96A23 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE4Q96A23 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE4Q96A23 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE4Q96A23 AC093503.3-201ENST00000624917 2352 ntBASIC16.45■□□□□ 0.22
CPNE4Q96A23 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
CPNE4Q96A23 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE4Q96A23 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.45■□□□□ 0.22
CPNE4Q96A23 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE4Q96A23 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE4Q96A23 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE4Q96A23 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CPNE4Q96A23 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CPNE4Q96A23 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE4Q96A23 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.44■□□□□ 0.22
CPNE4Q96A23 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.44■□□□□ 0.22
CPNE4Q96A23 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE4Q96A23 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
CPNE4Q96A23 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE4Q96A23 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE4Q96A23 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE4Q96A23 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE4Q96A23 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE4Q96A23 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE4Q96A23 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE4Q96A23 AC092597.1-201ENST00000487352 616 ntBASIC16.44■□□□□ 0.22
CPNE4Q96A23 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.44■□□□□ 0.22
CPNE4Q96A23 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.44■□□□□ 0.22
CPNE4Q96A23 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CPNE4Q96A23 AC079602.3-201ENST00000623931 403 ntBASIC16.44■□□□□ 0.22
CPNE4Q96A23 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.44■□□□□ 0.22
CPNE4Q96A23 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.44■□□□□ 0.22
CPNE4Q96A23 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE4Q96A23 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE4Q96A23 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.44■□□□□ 0.22
CPNE4Q96A23 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CPNE4Q96A23 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE4Q96A23 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE4Q96A23 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms