Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 AP003071.4-201ENST00000562276 1284 ntBASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 REXO1L12P-201ENST00000622156 912 ntBASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 CR392000.1-201ENST00000624770 1228 ntBASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40AQ8WXH6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB40AQ8WXH6 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 KRT16P1-201ENST00000399124 1418 ntBASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 NUDT16P1-203ENST00000513809 620 ntBASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 BX088651.1-201ENST00000540551 451 ntBASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 AL355075.4-201ENST00000554988 638 ntBASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 AC093677.2-201ENST00000600169 1863 ntBASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB40AQ8WXH6 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40AQ8WXH6 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40AQ8WXH6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
RAB40AQ8WXH6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40AQ8WXH6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40AQ8WXH6 AC112777.1-201ENST00000540175 1423 ntBASIC16.13■□□□□ 0.17
RAB40AQ8WXH6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40AQ8WXH6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms